Karpenahalli, M.; Söding, J.; Martin, J.; Lupas, A.: Automated scaffold selection in enzyme design. 12th Annual International Conference on Intelligent Systems for Molecular Biology & 3rd European Conference on Computational Biology (ISMB ECCB 2004), Glasgow, UK (2004)

Ullrich, T.: Computational Design and Optimization of G-CSFR Modulators. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2024)

Maksymenko, K.: Efficient design of protein-based binders. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2024)

Baßler, J.: Signal Transduction in Membrane-Bound Adenylate Cyclases. Dissertation, Eberhard Karls Universität, Tübingen, Germany (2018)

Karamichali, I.: Short Protein Evolution Stories: Illuminating Aspects of MempromCC and Histidine Kinase Evolution. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2018)

Ammelburg, M.: AAA Proteins and the Origins of Proteasomal Protein Degradation: AAA Proteine und die Ursprünge proteasomaler Proteindegradation. Dissertation, 155 S., Eberhard-Karls-Universität (2011)

Dunin-Horkawicz, S.: Coiled-coil proteins and signal transduction. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2010)

Theerthagiri Kuppusamy, B.: A functional analysis of the Nup188-Nup93 complex in the Nuclear Pore Complex. Dissertation, 132 S., Eberhard-Karls-Universität, Tübingen, Germany (2010)

Djuranovic, S.: Evolution der Substraterkennungsdomänen von AAA Proteinen: Evolution of substrate recognition domains of the AAA proteins. Dissertation, 171 S., Eberhard-Karls-Universität, Tübingen, Germany (2007)

Hulko, M.: Evolution von Double psi beta-barrel Proteinen und Aspartatproteasen: Evolution of double psi beta-barrel proteins und aspartic proteases. Dissertation, 115 S., Eberhard Karls Universität, Tübingen, Germany (2006)

Lupas, A.; Russell, R.: The structure of proteins. Journal of Structural Biology 179 (3), S. 251 (2012)

Lupas, A.: How Did the Three-Dimensional Structures of Proteins Evolve in Nature? (2016)

Mir-Montazeri, B.; Ammelburg, M.; Forouzan, D.; Lupas, A.; Hartmann, M.; Zeth, K.: Dimeric archaeal cleavage and polyadenylation specificity factor with n-terminal kh domains (kh-cpsf) from methanosarcina mazei. (2010)

Hartmann, M.; Ammelburg, M.; Djuranovic, S.; Martin, J.; Lupas, A.; Zeth, K.: Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP. (2007)

Hartmann, M.; Ammelburg, M.; Djuranovic, S.; Martin, J.; Lupas, A.; Zeth, K.: Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP and PO4. (2007)

Hartmann, M.; Ammelburg, M.; Djuranovic, S.; Martin, J.; Lupas, A.; Zeth, K.: Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with CDP and FMN. (2007)

Hartmann, M.; Djuranovic, S.; Ammelburg, M.; Martin, J.; Lupas, A.; Zeth, K.: Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with PO4. (2007)

Hu, Y.; Schwab, S.; Deiss, S.; Escudeiro, P.; Joiner, J.; Hartmann, M.; Lupas, A.; Hernandez, B.; Alva, V.; Dame, R.: Bacterial histone HBb from Bdellovibrio bacteriovorus compacts DNA by bending. (eingereicht)

Boudrioua, A.; Joiner, J.; Grin, I.; Kronenberger, T.; Korotkov, V.; Steinchen, W.; Kohler, A.; Schminke, S.; Schulte, J.-C.; Pietsch, M. et al.; Naini, A.; Kalverkamp, S.; Hotop, S.-K.; Coyle, T.; Piselli, C.; Coles, M.; Rox, K.; Marscha, M.; Bange, G.; Flieger, A.; Poso, A.; Brönstrup, M.; Hartmann, M.; Wagner, S.: Discovery of a synthetic small molecule targeting the central regulator of Salmonella pathogenicity. (eingereicht)

Madaj, R.; Martinez-Goikoetxea, M.; Kaminski, K.; Ludwiczak, J.; Dunin-Horkawicz, S.: Applicability of AlphaFold2 in the modelling of coiled-coil domains. (eingereicht)