Publications
_{Protein Evolution}

Borbaran Bravo, N.; Deordieva, E.; Doll, L.; ElGamacy, M.; Dannenmann, B.; Azevedo, J.; Iannuzzo, A.; Delafontaine, S.; Lehnerz, M.; Kolodziej, M. et al.; Hernandez-Alvarez, B.; Hellmuth, A.-S.; Findik, B.; Zakharova, V.; Bräuning, S.; Kandabarau, S.; Lengerke, C.; Feil, R.; Meytz, I.; Delon, J.; Templin, M.; Sturm, M.; Rieß, O.; Zeidler, C.; Welte, K.; Shcherbina, A.; Klimiankou, M.; Skokowa, J.: A New Severe Congenital Neutropenia Syndrome Associated with Autosomal Recessive COPZ1 Mutations. Blood 145 (20), pp. 2317 - 2335 (2025)

Boudrioua, A.; Joiner, J.; Grin, I.; Kronenberger, T.; Korotkov, V.; Steinchen, W.; Kohler, A.; Schminke, S.; Schulte, J.-C.; Pietsch, M. et al.; Naini, A.; Kalverkamp, S.; Hotop, S.-K.; Coyle, T.; Piselli, C.; Coles, M.; Rox, K.; Marschal, M.; Bange, G.; Flieger, A.; Poso, A.; Brönstrup, M.; Hartmann, M.; Wagner, S.: Discovery of synthetic small molecules targeting the central regulator of Salmonella pathogenicity. Science Advances 11 (15), eadr5235 (2025)

Fuchs, A.: Enzymatic Protein Fusions with 100% Product Yield. eLife 13, RP102765 (2025)

Isbilir, B.; Yeates, A.; Alva, V.; Bharat, T.: Mapping the ultrastructural topology of the corynebacterial cell surface. PLOS Biology 23 (4), e3003130 (2025)

Kanhema, T.; Parobczak, K.; Patil, S.; Holm-Kaczmarek, D.; Hallin, E.; Ludwiczak, J.; Szczepankiewicz, A.; Pauzin, F.; Mahboob, A.; Szum, A. et al.; Ishizuka, Y.; Dunin-Horkawicz, S.; Kursula, P.; Wilczynski, G.; Magalska, A.; Bramham, C.: Arc/Arg3.1 binds the nuclear polyadenylate-binding protein RRM and regulates neuronal activity-dependent formation of nuclear speckles. Cell Reports 44 (4), 115525 (2025)

Rados, T.; Leland, O.; Escudeiro, P.; Mallon, J.; Andre, K.; Caspy, I.; von Kügelgen, A.; Stolovicki, E.; Nguyen, S.; Patop, I. et al.; Rangel, T.; Kadener, S.; Renner, L.; Thiel, V.; Soen, Y.; Bharat, T.; Alva, V.; Bisson, A.: Tissue-Like Multicellular Development Triggered by Mechanical Compression in Archaea. Science 388 (6742), pp. 109 - 115 (2025)

Ananevaa, A.; Kantin, G.; Dar’in, D.; Bunev, A.; Ebeling, S.; Herrmann, A.; Hartmann, M.; Kalinin, S.; Bakulina, O.: Catalytic Castagnoli–Cushman reaction-based synthesis of tetrahydroisoquinolone–glutarimide dyads and their evaluation as potential cereblon ligands. Mendeleev Communications 35 (3) (2025)

Jiang, R.; Nilam, M.; Piselli, C.; Winterhalter, M.; Guo, D.-S.; Yu, S.; Hennig, A.; Nau, W.: Vesicle-Encapsulated Chemosensing Ensembles Allow Monitoring of Transmembrane Uptake Coupled with Enzymatic Reactions. Angewandte Chemie International Edition 64 (13), e202425157 (2025)

Piselli, C.: How to isolate channel-forming membrane proteins using the E. coli expression system. Nature Protocols 20 (2), pp. 462 - 479 (2025)

Waldherr, A.; Fogtman, A.: Radiation symptoms resemble laminopathies and the physical underlying cause may sit at the lamin A C-terminus. Molecular Medicine 31 (1), 69 (2025)

Bodin, S.; Elhabashy, H.; Macdonald, E.; Winter, D.; Gauthier-Rouvière, C.: Flotillins in membrane trafficking and physiopathology. Biology of the Cell 117 (1), e202400134 (2025)

Coban, A.; Bornberg-Bauer, E.; Kemena, C.: Tracing the paths of modular evolution by quantifying rearrangement events of protein domains. BMC Ecology and Evolution 25 (1), 6 (2025)

Khuzhakhmetova, L.; Ananeva, A.; Gantin, G.; Dar’in, D.; Bunev, A.; Ebeling, S.; Herrmann, A.; Hartmann, M.; Kalinin, S.; Bakulina, O.: Synthesis of α-(azidomethyl)glutarimide and its applicationin construction of potential Cereblon ligands via the CuAAC reaction. Mendeleev Communications 35 (1), pp. 69 - 72 (2025)

Madaj, R.; Martinez-Goikoetxea, M.; Kaminski, K.; Ludwiczak, J.; Dunin-Horkawicz, S.: Applicability of AlphaFold2 in the modeling of dimeric, trimeric, and tetrameric coiled-coil domains. Protein Science 34 (1), e5244 (2025)

Martinez-Goikoetxea, M.: CCfrag: Scanning folding potential of coiled-coil fragments with AlphaFold. Bioinformatics Advances 54 (1), vbae195 (2025)

Murray, D.; Jahnel, M.; Lauer, J.; Avellaneda, M.; Brouilly, N.; Cezanne, A.; Morales-Navarrete, H.; Perini, E.; Ferguson, C.; Lupas, A. et al.; Kalaidzidis, Y.; Parton, R.; Grill, S.; Zerial, M.: Author Correction: An endosomal tether undergoes an entropic collapse to bring vesicles together. Nature 637 (8048), p. E29 (2025)

Braun, V.: Substrate Uptake by TonB-Dependent Outer Membrane Transporters. Molecular Microbiology 122 (6), pp. 929 - 947 (2024)

Klett, T.; Stahlecker, J.; Jaag, S.; Masberg, B.; Knappe, C.; Lämmerhofer, M.; Coles, M.; Stehle, T.; Boeckler, F.: Covalent Fragments Acting as Tyrosine Mimics for Mutant p53-Y220C Rescue by Nucleophilic Aromatic Substitution. ACS Pharmacology & Translational Science 7 (12), pp. 3984 - 3999 (2024)

Landau, M.; Elsabbagh, S.; Gross, H.; Fuchs, A.; Schultz, A.; Schultz, J.: The membrane domains of mammalian adenylyl cyclases are lipid receptors. eLife 13, RP101483 (2024)

Curtis, Z.; Escudeiro, P.; Mallon, J.; Leland, O.; Rados , T.; Dodge, A.; Andre, K.; Kwak, J.; Yun, K.; Issac, B. et al.; Martinez Pastor, M.; Schmid, A.; Pohlschroder, M.; Alva, V.; Bisson, A.: Halofilins as Emerging Bactofilin Families of Archaeal Cell Shape Plasticity Orchestrators. Proceedings of the National Academy of Sciences of the United States of America 121 (40), e2401583121 (2024)