Fischer, J.; Lupas, A.; Söding, J.: A Novel Conservation Score For Functional Residue Prediction. In Automated Function Prediction: Biosapiens Joint Special Interest Group Meeting, S. 67. Automated Function Prediction: Biosapiens Joint Special Interest Group Meeting, Wien, Austria, 19. Juli 2007 - 20. Juli 2007. (2007)

Soeding, J.: Origin of bacterial transmembrane beta-barrels by duplication of a beta-beta hairpin. In 15th Annual International Conference on Intelligent Systems for Molecular Biology & 6th European Conference on Computational Biology (ISMB/ECCB 2007), PLoS Track: 10. 15th Annual International Conference on Intelligent Systems for Molecular Biology & 6th European Conference on Computational Biology (ISMB/ECCB 2007), Wien, Austria, 21. Juli 2007 - 25. Juli 2007. (2007)

Lupas, A.; Söding, J.: Homology-based structure prediction by HMM-HMM comparison and stochastic alignment sampling. In Critical Assessment of Techniques for Protein Structure Prediction: Seventh Meeting: CASP7, S. 11. Seventh Meeting Critical Assessment of Techniques for Protein Structure Prediction (CASP7), Pacific Grove, CA, USA, 26. November 2006 - 30. November 2006. (2006)

Söding, J.: Homology-based structure, function, and domain prediction by HMM-HMM comparison. In Critical Assessment of Techniques for Protein Structure Prediction: Seventh Meeting: CASP7, S. 53. Seventh Meeting Critical Assessment of Techniques for Protein Structure Prediction (CASP7), Pacific Grove, CA, USA, 26. November 2006 - 30. November 2006. (2006)

Söding, J.: Homology-based structure prediction by HMM-HMM comparison and multiple template selection. In Critical Assessment of Techniques for Protein Structure Prediction: Seventh Meeting: CASP7, S. 53 - 54. Seventh Meeting Critical Assessment of Techniques for Protein Structure Prediction (CASP7), Pacific Grove, CA, USA, 26. November 2006 - 30. November 2006. (2006)

Söding, J.: Homology-based structure, function, and domain prediction by HMM-HMM comparison, multiple template selection, and intermediate profile search. In Critical Assessment of Techniques for Protein Structure Prediction: Seventh Meeting: CASP7, S. 54 - 55. Seventh Meeting Critical Assessment of Techniques for Protein Structure Prediction (CASP7), Pacific Grove, CA, USA, 26. November 2006 - 30. November 2006. (2006)

Gruber, M.; Söding, J.; Lupas, A.: REPPER-repeats and their periodicities in fibrous proteins. In 1st International Student Symposium in Computational Biology, 14. 1st International Student Symposium in Computational Biology at ECCB 2005, Madrid, Spain, 28. September 2005. (2005)

Chaudhuri, I.; Coles, M.; Martin, J.; Lupas, A.: Trapping the building blocks of b-propeller proteins. In The FEBS Journal, 272 (Supplement 1), A2-005, S. 79. 30th FEBS Congress and the 9th IUBMB Conference: The Protein World, Budapest, Hungary, 02. Juli 2005 - 07. Juli 2005. Wiley-Blackwell (2005)

Djuranovic, S.; Truffault, V.; Coles, M.; Zeth, K.; Martin, J.; Lupas, A.: Structure and activity of different N-terminal domains from AAA-proteins. In The FEBS Journal, 272 (Supplement 1), A2-022P, S. 84. 30th FEBS Congress and the 9th IUBMB Conference: The Protein World, Budapest, Hungary, 02. Juli 2005 - 07. Juli 2005. Wiley-Blackwell (2005)

Söding, J.: Homology detection and 3D structure prediction by HMM-HMM comparison. In Sixth Meeting on the Critical Assessment of Techniques for Protein Structure Prediction (CASP6), S. 66 - 67. Sixth Meeting on the Critical Assessment of Techniques for Protein Structure Prediction (CASP6), Gaeta, Italy, 04. Dezember 2004 - 08. Dezember 2004. (2004)

Söding, J.; Biegert, A.; Lupas, A.: HHpred web server for distant homology detection and structure prediction. In Sixth Meeting on the Critical Assessment of Techniques for Protein Structure Prediction (CASP6), S. 177 - 178. Sixth Meeting on the Critical Assessment of Techniques for Protein Structure Prediction (CASP6), Gaeta, Italy, 04. Dezember 2004 - 08. Dezember 2004. (2004)

Riess, T.; Andersson, S.; Lupas, A.; Schaller, M.; Wälzlein, J.-H.; Ehehalt, U.; Lindroos, H.; Schirle, M.; Nordheim, A.; Autenrieth, I. et al.; Kempf, V.: Bartonella henselae adhesin A (BadA), a novel non-fimbrial adhesin mediating a proangiogenic host cell response. In International Journal of Medical Microbiology, 294 (Supplement 1), MEV001, S. 94. 56. Jahrestagung der Deutschen Gesellschaft fur Hygiene und Mikrobiologie (DGHM 2004) in Zusammenarbeit mit der Deutschen Veterinärmedizinischen Gesellschaft (DVG), Fachgruppe Bakteriologie und Mykologie, Münster, Germany, 26. September 2004 - 29. September 2004. Urban & Fischer, Jena, Germany (2004)

Soeding, J.; Lupas, A.: Homology Search By HMM-HMM Comparison Detects More Than Three Times As Many Remote Homologs as PSIBLAST or HMMER. In 1st Structural Bioinformatics Meeting at ISMB/ECCB2004, 41, S. 21 - 22. 1st Structural Bioinformatics Meeting at ISMB/ECCB 2004, Glasgow, UK, 29. Juli 2004 - 30. Juli 2004. (2004)

Bornberg-Bauer, E.: De novo proteins: now you see them, now you don't. World Summit on Genetics and Molecular Biology (GMBSUMMIT2025), Nice, France (2025)

Piselli, C.: Characterization and inhibition of Salmonella's central pathogenicity regulator: HilD. BioConnect Seminar: Max Planck Institute for Biology, Tübingen, Germany (2025)

Lupas, A.: New protein fibers from the dark proteome. 3rd ML4NGP Meeting on Machine Learning and Non-Globular Proteins, Vilnius, Lithuania (2025)

Fuchs, A.: Specific protein fusions with Connectase. BioConnect Seminar: Max Planck Institute for Biology, Tübingen, Germany (2025)

Hu, Y.: Bacterial histones: To wrap or not to wrap? BioConnect Seminar: Max Planck Institute for Biology, Tübingen, Germany (2025)

Dunin-Horkawicz, S.: What can we learn from incorrect AlphaFold2 models? The case of signal transduction. BioConnect Seminar: Max Planck Institute for Biology, Tübingen, Germany (2024)

Lupas, A.: The virtual proteome of life: What is it and why should we care? 2nd Meeting on Machine Learning and Non-Globular Proteins (ML4NGP), Thessaloniki, Greece (2024)