Publikationen des Instituts

Sommer, R.: Pristionchus - Beetle associations: Towards a new natural history. Journal of Invertebrate Pathology 209, 108243 (2025)

Bi, G.; Zhao, S.; Jao, J.; Wang, H.; Zhao, M.; Sun, Y.; Hou, X.; Haas, F.; Varshney, D.; Prigge, M. et al.; Rensing, S.; Jiao, Y.; Ma, Y.; Yan, J.; Dai, J.: Author Correction: Near telomere-to-telomere genome of the model plant Physcomitrium patens. Nature Plants Epub ahead (2025)

Chen, H.; Xiong, F.; Wangler, A.-M.; Bischoff, T.; Wang, K.; Miao, Y.; Slane, D.; Schwab, R.; Laux, T.; Bayer, M.: Phosphorylation-Dependent Activation of the bHLH Transcription Factor ICE1/SCRM Promotes Polarization of the Arabidopsis Zygote. New Phytologist 245 (3), S. 1029 - 1039 (2025)

Coban, A.; Bornberg-Bauer, E.; Kemena, C.: Tracing the paths of modular evolution by quantifying rearrangement events of protein domains. BMC Ecology and Evolution 25 (1), 6 (2025)

Dimore, A.; Kuplicki, R.; McDonald, D.; Kumar, M.; Estaki, M.; Youngblut, N.; Tyakht, A.; Ackermann, G.; Blach, C.; MahmoudianDehkordi, S. et al.; Dunlop, B.; Bhattacharyya, S.; Guinjoan, S.; Mandaviya, P.; Ley, R.; Kaddaruh-Dauok, R.; Paulus, M.; Knight, R.; Alzheimer Gut Microbiome Project Consortium: Medication Use is Associated with Distinct Microbial Features in Anxiety and Depression. Molecular Psychiatry Epub ahead (2025)

Duchêne, C.; Bouly, J.-P.; Pierella Karlusich, J.; Vernay, P.; Sellés, J.; Bailleul, P.; Bowler, C.; Ribera d'Alcalà, M.; Falciatore, A.; Jaubert, M.: Diatom phytochromes integrate the underwater light spectrum to sense depth. Nature 637 (8046), S. 691 - 697 (2025)

Fagundes, W.; Huang, Y.-S.; Häußler, S.; Langner, T.: From Lesions to Lessons: Two Decades of Filamentous Plant Pathogen Genomics. Molecular Plant-Microbe Interactions Epub ahead (2025)

Giorgetti, O.; Haas-Assenbaum, A.; Boehm, T.: Probing TCR Specificity Using Artificial In Vivo Diversification of CDR3 Regions. European Journal of Immunology 55 (1), e202451434 (2025)

Jiang, R.; Nilam, M.; Piselli, C.; Winterhalter, M.; Guo, D.-S.; Yu, S.; Hennig, A.; Nau, W.: Vesicle-Encapsulated Chemosensing Ensembles Allow Monitoring of Transmembrane Uptake Coupled with Enzymatic Reactions. Angewandte Chemie International Edition Epub ahead, e202425157 (2025)

Kirsch, R.; Okamura, Y.; García-Lozano, M.; Weiss, B.; Keller, J.; Vogel, H.; Fukumori, K.; Fukatsu, T.; Konstantinov, A.; Montagna, M. et al.; Moseyko, A.; Riley, E.; Slipinski, A.; Vencl, F.; Windsor, D.; Salem, H.; Kaltenpoth, M.; Pauchet, Y.: Symbiosis and horizontal gene transfer promote herbivory in the megadiverse leaf beetles. Current Biology Epub ahead (2025)

Liesner, D.; Cossard, G.; Zheng, M.; Godfroy, O.; Barrera Redondo, J.; Haas, F.; Coelho, S.: Developmental pathways underlying sexual differentiation in the U/V sex chromosome system of giant kelp. Developmental Cell Epub ahead (2025)

Madaj, R.; Martinez-Goikoetxea, M.; Kaminski, K.; Ludwiczak, J.; Dunin-Horkawicz, S.: Applicability of AlphaFold2 in the modeling of dimeric, trimeric, and tetrameric coiled-coil domains. Protein Science 34 (1), e5244 (2025)

Martinez-Goikoetxea, M.: CCfrag: Scanning folding potential of coiled-coil fragments with AlphaFold. Bioinformatics Advances 54 (1), vbae195 (2025)

Mencia, R.; Arce, A.; Houriet, C.; Xian, W.; Contreras, A.; Shirsekar, G.; Weigel, D.; Manavella, P.: Transposon-triggered epigenetic chromatin dynamics modulate EFR-related pathogen response. Nature Structural & Molecular Biology 32 (1), S. 199 - 211 (2025)

Murray, D.; Jahnel, M.; Lauer, J.; Avellaneda, M.; Brouilly, N.; Cezanne, A.; Morales-Navarrete, H.; Perini, E.; Ferguson, C.; Lupas, A. et al.; Kalaidzidis, Y.; Parton, R.; Grill, S.; Zerial, M.: Author Correction: An endosomal tether undergoes an entropic collapse to bring vesicles together. Nature Epub ahead (2025)

Petroll, R.; Varshney, D.; Hiltemann, S.; Finke, H.; Schreiber, M.; de Vries, J.; Rensing, S.: Enhanced sensitivity of TAPscan v4 enables comprehensive analysis of streptophyte transcription factor evolution. The Plant Journal 121 (1), e17184 (2025)

Piskobulu, V.; Athanasouli, M.; Witte, H.; Feldhaus, C.; Streit, A.; Sommer, R.: High nutritional conditions influence feeding plasticity in Pristionchus pacificus and render worms non-predatory. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution Epub ahead (2025)

Xian, W.; Bezrukov, I.; Bao, Z.; Vorbrugg, S.; Gautam, A.; Weigel, D.: TIPPo: A User-Friendly Tool for De Novo Assembly of Organellar Genomes with High-Fidelity Data. Molecular Biology and Evolution 42 (1), msae247 (2025)

Zou, Y.; Ohlsson, J.; Holla, S.; Sabljić, I.; Leong, J.; Ballhaus, F.; Krebs, M.; Schumacher, K.; Moschou, P.; Stael, S. et al.; Üstün, S.; Dagdas, Y.; Bozhkov, P.; Minina, E.: ATG8 delipidation is not universally critical for autophagy in plants. Nature Communications 16 (1), 403 (2025)

Almeida, A.; Rocha, H.; Raas, M.; Witte, H.; Sommer, R.; Snel, B.; Kops, G.; Gassmann, R.; Maiato, H.: An evolutionary perspective on the relationship between kinetochore size and CENP-E dependence for chromosome alignment. Journal of Cell Science 137 (24), jcs263466 (2024)