Manavella, P.; Rubio-Somoza, I.: Engineering Elements for Gene Silencing: The Artificial MicroRNAs Technology. In: Methods in Molecular Biology, Bd. 732. Springer, US (2011)

Rubio-Somoza, I.; Manavella, P.: Mimicry technology: suppressing small RNA activity in plants. In: Methods in Molecular Biology, Bd. 732. Springer, US (2011)

Janzing, D.; Sgouritsa, E.; Stegle, O.; Peters, J.; Schölkopf, B.: Detecting low-complexity unobserved causes. In: 27th Conference on Uncertainty in Artificial Intelligence (UAI 2011), S. 383 - 391. 27th Conference on Uncertainty in Artificial Intelligence (UAI 2011), Barcelona, Spain, 14. Juli 2011 - 17. Juli 2011. (2011)

Kam-Thong, T.; Pütz, B.; Karbalai, N.; Müller−Myhsok, B.; Borgwardt, K.: Epistasis detection on quantitative phenotypes by exhaustive enumeration using GPUs. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria, 17. Juli 2011 - 19. Juli 2011. Bioinformatics 27 (13), S. i214 - i221 (2011)

Lei, L.; Rakitsch, B.; Borgwardt, K.: ccSVM: correcting Support Vector Machines for confounding factors in biological data classification. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria, 17. Juli 2011 - 19. Juli 2011. Bioinformatics 27 (13), S. i342 - i348 (2011)

Klotzbücher, K.; Kobayashi, Y.; Shervashidze, N.; Stegle, O.; Müller-Myhsok, B.; Weigel, D.; Borgwardt, K.: Efficient branch-and-bound techniques for two-locus association mapping. In BMC Bioinformatics, 12 (Supplement 11), A3. Seventh International Society for Computational Biology (ISCB) Student Council Symposium 2011, Wien, Austria, 15. Juli 2011. BioMed Central (2011)

Rowan, B.; Bomblies, K.; Schneeberger, K.; Ossowski, S.; Lanz, C.; Weigel, D.: Natural modifiers of hybrid necrosis in Arabidopsis thaliana. In 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), S. 991. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany, 20. August 2011 - 25. August 2011. (2011)

Smith, L.; Bomblies, K.; Weigel, D.: Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility. In 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), S. 1013. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany, 20. August 2011 - 25. August 2011. (2011)

Fenster, C.; Rutter, M.; Roles, A.; Conner, J.; Shaw, R.; Schneeberger, K.; Ossowski, S.; Weigel, D.: Spontaneous mutations and fitness. In Evolution 2011, 044006. Evolution 2011, Norman, OK, USA, 17. Juni 2011 - 21. Juni 2012. (2011)

Gan, X.; Behr, J.; Steffen, J.; Hildebrand, K.; Allchin, L.; Goodstadt, L.; Stegle, O.; Drewe, P.; Lyngsoe, R.; Sreedharan, V. et al.; Osborne, E.; Toomajian, C.; Kover, P.; Rätsch, G.; Clark, R.; Mott, R.: Accurate Sequencing of 18 Genomes of Arabidopsis thaliana and Its Use in Imputing the Genome Sequences of Over 600 MAGIC Recombinant Inbred Lines. In 22nd International Conference on Arabidopsis Research (ICAR 2011), 22, S. 78. 22nd International Conference on Arabidopsis Research (ICAR 2011), Madison, WI, USA, 22. Juni 2011 - 25. Juni 2011. (2011)

Navarro, M.; Acevedo, G.; Cazaux, M.; Mathieu, J.; Schmid, M.; Grbic, M.; Grbic, V.: Genomic Dissection of the Plant/Pest Interaction: Transcriptome Analysis of Arabidopsis Response to Tetranychus urticae (Two Spotted Spider Mite) Feeding. In 22nd International Conference on Arabidopsis Research (ICAR 2011), 63, S. 92. 22nd International Conference on Arabidopsis Research (ICAR 2011), Madison, WI, USA, 22. Juni 2011 - 25. Juni 2011. (2011)

Günther, T.; Cao, J.; Schneeberger, K.; Ossowski, S.; Weigel, D.; Schmid, K.: Finding the traces of selection in the genome of Arabidopsis thaliana. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Guo, Y.-L.; Hu, T.; Pattyn, P.; Bakker, E.; Cao, J.; Cheng, J.-F.; Clark, R.; Fahlgren, N.; Fawcett, J.; Grimwood, J. et al.; Gundlach, H.; Haberer, G.; Hollister, J.; Ossowski, S.; Ottilar, R.; Salamov, A.; Schneeberger, K.; Spannagl, M.; Wang, X.; Yang, L.; Nasrallah, M.; Bergelson, J.; Carrington, J.; Gaut, B.; Schmutz, J.; Mayer, K.; Van de Peer, Y.; Grigoriev, I.; Nordborg, M.; Weigel, D.: The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Kim, S.-T.; Mao, J.-F.; Hagmann, J.; Lanz, C.; Cao, J.; Guo, Y.-L.; Schneeberger, K.; Weigel, D.: Contrasting whole-genome sequence diversity in the selfer Arabidopsis thaliana and the outcrosser A. lyrata. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Koenig, D.; Slotte, T.; Hagmann, J.; Neuffer, B.; Weigel, D.: Population genomic analysis of speciation and radiation in Capsella rubella. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Kottler, V.; Weigel, D.; Dreyer, C.: Guppy golden and blue mutants provide novel insights into pattern formation of coloration. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Mao, J.-F.; Wang, X.-R.: Detecting niche divergence in an allopatric hybrid species complex of Pinus densata, P. tabuliformis and P. yunnanensis. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Sharma, E.; Zipprich, G.; Henz, S.; Dreyer, C.; Weigel, D.: Transcriptome of Poecilia reticulata and comparative analysis for identification of sex-linked loci associated with evolution of the guppy sex chromosomes. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Wang, G.; Stegle, O.; Rowan, B.; Dillon, M.; Weigel, D.: Detecting climate signals in genomes: A GWA approach to find footprints of climate selection in the Arabidopsis thaliana genome using new measures of climatic variability. 13th Congress of the European Society for Evolutionary Biology (ESEB 2011), Tübingen, Germany (2011)

Grimm, D.; Hagmann, J.; Koenig, D.; Weigel, D.; Borgwardt, K.: Support Vector Machines for finding deletions and short insertions using paired-end short reads. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB ECCB 2011), Wien, Austria (2011)