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Grin, I.: Assisted Secretion of a Trimeric Autotransporter Adhesin from Salmonella. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2015)

Chellamuthu, V.: Novel structures of PII signal transduction proteins from oxygenic phototropic organisms. Dissertation, 111 pp., Eberhard-Karls-Universität, Tübingen, Germany (2014)

Hartmann, M.: Trimeric autotransporter adhesins and the coiled-coil standard model. Dissertation, 84 pp., Eberhard-Karls-Universität, Tübingen, Germany (2012)

Römer, C.: Funktionelle Untersuchungen von Colicin M und seinem Immunitätsprotein. Dissertation, 136 pp., Eberhard-Karls-Universität, Tübingen, Germany (2012)

Ammelburg, M.: AAA Proteins and the Origins of Proteasomal Protein Degradation: AAA Proteine und die Ursprünge proteasomaler Proteindegradation. Dissertation, 155 pp., Eberhard-Karls-Universität (2011)

Dunin-Horkawicz, S.: Coiled-coil proteins and signal transduction. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2010)

Theerthagiri Kuppusamy, B.: A functional analysis of the Nup188-Nup93 complex in the Nuclear Pore Complex. Dissertation, 132 pp., Eberhard-Karls-Universität, Tübingen, Germany (2010)

Djuranovic, S.: Evolution der Substraterkennungsdomänen von AAA Proteinen: Evolution of substrate recognition domains of the AAA proteins. Dissertation, 171 pp., Eberhard-Karls-Universität, Tübingen, Germany (2007)

Diemand, A.: Development of Homology Modeling Techniques. Dissertation, 125 pp., Eberhard-Karls-Universität, Tübingen, Germany (2006)

Hulko, M.: Evolution von Double psi beta-barrel Proteinen und Aspartatproteasen: Evolution of double psi beta-barrel proteins und aspartic proteases. Dissertation, 115 pp., Eberhard Karls Universität, Tübingen, Germany (2006)

Karpenahalli, M.: Untersuchungen zur Domänenevolution von Proteinen:Design neuer TPR-ähnlicher Domänen: Exploring protein domain evolution by designing new TPR-like domains. Dissertation, 121 pp., Eberhard-Karls-Universität, Tübingen, Germany (2006)

Waldherr, A.; Cohen, I.; Kop, M.: Quantum Trials: An FDA for Quantum Technology. Stanford Center for RQT Research Series Epub ahead (2025)

Henning, T.; Lupas, A.: The origin of life. (2014), 18 pp.

Lupas, A.; Russell, R.: The structure of proteins. Journal of Structural Biology 179 (3), p. 251 (2012)

Fuchs, A.; Ammelburg, M.; Hartmann, M.: Archaeal peptide recombinase? A novel peptide ligating enzyme. 20240174999 (2024)

ElGamacy, M.; Hernandez-Alvarez, B.; Skokowa, J.: Novel g-csf mimics and their applications. WO2021123033A1 (2020)

Pack, P.; Lupas, A.: Targeted hetero-association of recombinant proteins to multi-functional complexes. US6294353B1 (2001)

Lupas, A.: How Did the Three-Dimensional Structures of Proteins Evolve in Nature? (2016)

Mir-Montazeri, B.; Ammelburg, M.; Forouzan, D.; Lupas, A.; Hartmann, M.; Zeth, K.: Dimeric archaeal cleavage and polyadenylation specificity factor with n-terminal kh domains (kh-cpsf) from methanosarcina mazei. (2010)