Publications
Protein Evolution

Journal Article (15)

1.
Journal Article
Thijssen, B.; Dijkstra, T.; Heskes, T.; Wessels, L.: BCM: toolkit for Bayesian analysis of Computational Models using samplers. BMC Systems Biology 10, 100 (2016)
2.
Journal Article
Murray, D.; Jahnel, M.; Lauer, J.; Avellaneda, M.; Brouilly, N.; Cezanne, A.; Morales-Navarrete, H.; Perini, E.; Ferguson, C.; Lupas, A. et al.; Kalaidzidis, Y.; Parton, R.; Grill, S.; Zerial, M.: An endosomal tether undergoes an entropic collapse to bring vesicles together. Nature 537 (7618), pp. 107 - 111 (2016)
3.
Journal Article
Shah, R.; Large, A.; Ursinus, A.; Lin, B.; Gowrinathan, P.; Martin, J.; Lund, P.: Replacement of GroEL in Escherichia coli by the Group II Chaperonin from the Archaeon Methanococcus maripaludis. Journal of Bacteriology 198 (19), pp. 2692 - 2700 (2016)
4.
Journal Article
Zhu, H.; Sepulveda, E.; Hartmann, M.; Kogenaru, M.; Ursinus, A.; Sulz, E.; Albrecht, R.; Coles, M.; Martin, J.; Lupas, A.: Origin of a folded repeat protein from an intrinsically disordered ancestor. eLife 5 (26), e16761 (2016)
5.
Journal Article
Alva, V.; Lupas, A.: The TULIP superfamily of eukaryotic lipid-binding proteins as a mediator of lipid sensing and transport. Biochimica et Biophysica Acta: BBA 1861 (8 Part B), pp. 913 - 923 (2016)
6.
Journal Article
Alva, V.; Nam, S.-Z.; Söding, J.; Lupas, A.: The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis. Nucleic Acids Research (London) 44 (W1), pp. W410 - W415 (2016)
7.
Journal Article
Martini, J.; Diambra, L.; Habeck, M.: Cooperative binding: A multiple personality. Journal of Mathematical Biology 72 (7), pp. 1747 - 1774 (2016)
8.
Journal Article
Enthart, A.; Klein, C.; Dehner, A.; Coles, M.; Gemmecker, G.; Kessler, H.; Hagn, F.: Solution structure and binding specificity of the p63 DNA binding domain. Scientific Reports 6, 26707 (2016)
9.
Journal Article
Eipper, S.; Steiner, R.; Lesner, A.; Sienczyk, M.; Palesch, D.; Halatsch, M.-E.; Zaczynska, E.; Heim, C.; Hartmann, M.; Zimecki, M. et al.; Wirtz, C.; Burster, T.: Lactoferrin Is an Allosteric Enhancer of the Proteolytic Activity of Cathepsin G. PLoS One 11 (3), e0151509 (2016)
10.
Journal Article
Ghosh, P.; Vaidya, A.; Kumar, A.; Rangachari, V.: Determination of critical nucleation number for a single nucleation amyloid-β aggregation model. Mathematical Biosciences 273, pp. 70 - 79 (2016)
11.
Journal Article
Beltz, S.; Bassler, J.; Schultz, J.: Regulation by the quorum sensor from Vibrio indicates a receptor function for the membrane anchors of adenylate cyclases. eLife 5, e13098 (2016)
12.
Journal Article
Koiwai, K.; Hartmann, M.; Linke, D.; Lupas, A.; Hori, K.: Structural Basis for Toughness and Flexibility in the C-terminal Passenger Domain of an Acinetobacter Trimeric Autotransporter Adhesin. The Journal of Biological Chemistry 291 (8), pp. 3705 - 3724 (2016)
13.
Journal Article
Boichenko, I.; Deiss, S.; Bär, K.; Hartmann, M.; Hernandez Alvarez, B.: A FRET-Based Assay for the Identification and Characterization of Cereblon Ligands. Journal of Medicinal Chemistry 59 (2), pp. 770 - 774 (2016)
14.
Journal Article
Hartmann, M.; Mendler, C.; Bassler, J.; Karamichali, I.; Ridderbusch, O.; Lupas, A.; Hernandez Alvarez, B.: α/β coiled coils. eLife 5, e11861 (2016)
15.
Journal Article
Pozzi, R.; Coles, M.; Linke, D.; Kulik, A.; Nega, M.; Wohlleben, W.; Stegmann, E.: Distinct mechanisms contribute to immunity in the lantibiotic NAI-107 producer strain Microbispora ATCC PTA-5024. Environmental Microbiology 18 (1), pp. 118 - 132 (2016)

Book Chapter (1)

16.
Book Chapter
Michalik, M.; Djahanshiri, B.; Leo, J.; Linke, D.: Reverse Vaccinology: The Pathway from Genomes and Epitope Predictions to Tailored Recombinant Vaccines. In: Methods in Molecular Biology, Vol. 1403. Springer, US (2016)

Conference Paper (1)

17.
Conference Paper
Kryshtafovych, A.; Moult, J.; Baslé, A.; Burgin, A.; Craig, T.; Edwards, R.; Fass, D.; Hartmann, M.; Korycinski, M.; Lewis, R. et al.; Lorimer, D.; Lupas, A.; Newman, J.; Peat, T.; Piepenbrink, K.; Prahlad, J.; van Raaij, M.; Rohwer, F.; Segall, A.; Seguritan, V.; Sundberg, E.; Singh, A.; Wilson, M.; Schwede, T.: Some of the most interesting CASP11 targets through the eyes of their authors. Eleventh Meeting on the Critical Assessment of Techniques for Protein Structure Prediction, Riviera Maya, Mexico, December 07, 2014 - December 10, 2014. Proteins: Structure, Function, and Bioinformatics 84 (S1), pp. 34 - 50 (2016)

Talk (2)

18.
Talk
Coles, M.; Lupas, A.: On the Origin of Folded Proteins. Institut Pasteur, Paris, France (2016)
19.
Talk
Lupas, A.: Coiled coils: between structure and unstructure. 2nd NGP-NET Symposium on Non-Globular Proteins: Non-Globular Proteins in Molecular Physiopathology, Beograd, Serbia (2016)

Film (1)

20.
Film
Lupas, A.: How Did the Three-Dimensional Structures of Proteins Evolve in Nature? (2016)
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