Publications of the Institute

Dulovic, A.; Renahan, T.; Röseler, W.; Rödelsperger, C.; Rose, A.; Streit, A.: Rhabditophanes diutinus a parthenogenetic clade IV nematode with dauer larvae. PLoS Pathogens 16 (12), e1009113 (2020)

Gabler, F.; Nam, S.-Z.; Till, S.; Mirdita, M.; Steinegger, M.; Söding, J.; Lupas, A.; Alva, V.: Protein sequence analysis using the MPI Bioinformatics Toolkit. Current Protocols in Bioinformatics 72 (1), e108 (2020)

Han, Z.; Lo, W.-S.; Lightfoot, J.; Witte, H.; Sun, S.; Sommer, R.: Improving transgenesis efficiency and CRISPR-associated tools through codon optimization and native intron addition in Pristionchus nematodes. Genetics 216 (4), pp. 947 - 956 (2020)

Hernandez Alvarez, B.; Skokowa, J.; Coles, M.; Mir, P.; Nasri, M.; Weidmann, L.; Rogers, K.; Welte, K.; Lupas, A.; Müller, P. et al.; ElGamacy, M.: Design of novel granulopoietic proteins by topological rescaffolding. PLoS Biology 18 (12), e3000919 (2020)

Hüther, P.; Schandry, N.; Jandrasits, K.; Bezrukov, I.; Becker, C.: ARADEEPOPSIS, an Automated Workflow for Top-View Plant Phenomics using Semantic Segmentation of Leaf States. The Plant Cell 32 (12), pp. 3674 - 3688 (2020)

Klare, J.; Rurik, M.; Rottmann, E.; Bollen, A.; Kohlbacher, O.; Fischer, M.; Hackl, T.: Determination of the Geographical Origin of Asparagus officinalis L. by 1 H NMR Spectroscopy. Journal of Agricultural and Food Chemistry 68 (49), pp. 14353 - 14363 (2020)

Latorre, S.; Lang, P.; Burbano, H.; Gutaker, R.: Isolation, Library Preparation, and Bioinformatic Analysis of Historical and Ancient Plant DNA. Current Protocols in Plant Biology 5 (4), e20121 (2020)

Lee, J.; Goretti, D.; Neumann, M.; Schmid, M.; You, Y.: A gibberellin methyltransferase modulates the timing of floral transition at the Arabidopsis shoot meristem. Physiologia Plantarum 170 (4), pp. 474 - 487 (2020)

Maiwald, S.; Heim, C.; Hernandez Alvarez, B.; Hartmann, M.: Sweet and Blind Spots in E3 Ligase Ligand Space Revealed by a Thermophoresis-Based Assay. ACS Medicinal Chemistry Letters 12 (1), pp. 74 - 81 (2020)

Netz, E.; Dijkstra, T.; Sachsenberg, T.; Zimmermann, L.; Walzer, M.; Monecke, T.; Ficner, R.; Dybkiv, O.; Urlaub, H.; Kohlbacher, O.: OpenPepXL: An open-source tool for sensitive identification of cross-linked peptides in XL-MS. Molecular and Cellular Proteomics 19 (12), pp. 2157 - 2168 (2020)

Podobnik, M.; Frohnhoefer, H.-G.; Dooley, C.; Eskova, A.; Nuesslein-Volhard, C.; Irion, U.: Evolution of the potassium channel gene Kcnj13 underlies colour pattern diversification in Danio fish. Nature Communications 11 (1), 6230 (2020)

Seefelder, M.; Alva, V.; Huang, B.; Engler, T.; Baumeister, W.; Guo, Q.; Fernandez-Busnadiego, R.; Lupas, A.; Kochanek, S.: The evolution of the huntingtin-associated protein 40 (HAP40) in conjunction with huntingtin. BMC Evolutionary Biology 20 (1), 162 (2020)

Suzuki, T.; Ley, R.: The role of the microbiota in human genetic adaptation. Science 370 (6521), eaaz6827, p. 9 (2020)

Blackwell, A.; Dluzewska, J.; Szymanska-Lejman, M.; Desjardins, S.; Tock, A.; Kbiri, N.; Lambing, C.; Lawrence, E.; Bieluszewski, T.; Rowan, B. et al.; Higgins, J.; Ziolkowski, P.; Henderson, I.: MSH2 shapes the meiotic crossover landscape in relation to interhomolog polymorphism in Arabidopsis. EMBO Journal 39 (21), e104858 (2020)

Chen, Y.-C.; Kuo, H.-C.; Lo, W.-S.; Hung, C.-M.: Avian phenotypic convergence is subject to low genetic constraints based on genomic evidence. BMC Evolutionary Biology 20 (1), 147 (2020)

Leitner, A.; Bonvin, A.; Borchers, C.; Chalkley, R.; Chamot-Rooke, J.; Combe, C.; Cox, J.; Dong, M.-Q.; Fischer, L.; Götze, M. et al.; Gozzo, F.; Heck, A.; Hoopmann, M.; Huang, L.; Ishihama, Y.; Jones, A.; Kalisman, N.; Kohlbacher, O.; Mechtler, K.; Moritz, R.; Netz, E.; Novak, P.; Petrotchenko, E.; Sali, A.; Scheltema, R.; Schmidt, C.; Schriemer, D.; Sinz, A.; Sobott, F.; Stengel, F.; Thalassinos, K.; Urlaub, H.; Viner, R.; Vizcaíno, J.; Wilkins, M.; Rappsilber, J.: Toward increased reliability, transparency, and accessibility in cross-linking mass spectrometry. Structure 28 (11), pp. 1259 - 1268 (2020)

Montgomery, J.; Giacomini, D.; Waithaka, B.; Lanz, C.; Murphy, B.; Campe, R.; Lerchl, J.; Landes, A.; Gatzmann, F.; Janssen, A. et al.; Antonise, R.; Patterson, E.; Weigel, D.; Tranel, P.: Draft Genomes of Amaranthus tuberculatus, Amaranthus hybridus, and Amaranthus palmeri. Genome Biology and Evolution 12 (11), pp. 1988 - 1993 (2020)

Nega, M.; Tribelli, P.; Hipp, K.; Stahl, M.; Götz, F.: New insights in the coordinated amidase and glucosaminidase activity of the major autolysin (Atl) in Staphylococcus aureus. Communications Biology 3 (1), 695 (2020)

Ponnu, J.; Schlereth, A.; Zacharaki, V.; Działo, M.; Abel, C.; Feil, R.; Schmid, M.; Wahl, V.: The Trehalose 6-Phosphate Pathway Impacts Vegetative Phase Change in Arabidopsis thaliana. The Plant Journal 104 (3), pp. 768 - 780 (2020)

Prokchorchik, M.; Pandey, A.; Moon, H.; Kim, W.; Jeon, H.; Jung, G.; Jayaraman, J.; Poole, S.; Segonzac, C.; Sohn, K. et al.; McCann, H.: Host adaptation and microbial competition drive Ralstonia solanacearum phylotype I evolution in the Republic of Korea. Microbial Genomics 6 (11), mgen000461 (2020)