Publications of the Institute

Albrecht, R.; Zeth, K.: Crystallization and preliminary X-ray data collection of the Escherichia coli lipoproteins BamC, BamD and BamE. Acta Crystallographica Section F: Structural Biology and Crystallization Communications 66 (12), pp. 1586 - 1590 (2010)

Gerstein, M.; Lu, Z.; Van Nostrand, E.; Cheng, C.; Arshinoff, B.; Liu, T.; Yip, K.; Robilotto, R.; Rechtsteiner, A.; Ikegami, K. et al.; Alves, P.; Chateigner, A.; Perry, M.; Morris, M.; Auerbach, R.; Feng, X.; Leng, J.; Vielle, A.; Niu, W.; Rhrissorrakrai, K.; Agarwal, A.; Alexander, R.; Barber, G.; Brdlik, C.; Brennan, J.; Brouillet, J.; Carr, A.; Cheung, M.-S.; Clawson, H.; Contrino, S.; Dannenberg, L.; Dernburg, A.; Desai, A.; Dick, L.; Dosé, A.; Du, J.; Egelhofer, T.; Ercan, S.; Euskirchen, G.; Ewing, B.; Feingold, E.; Gassmann, R.; Good, P.; Green, P.; Gullier, F.; Gutwein, M.; Guyer, M.; Habegger, L.; Han, T.; Henikoff, J.; Henz, S.; Hinrichs, A.; Holster, H.; Hyman, A.; Iniguez, A. L.; Janette, J.; Jensen, M.; Kato, M.; Kent, W. J.; Kephart, E.; Khivansara, V.; Khurana, E.; Kim, J. K.; Kolasinska-Zwierz, P.; Lai, E. C.; Latorre, I.; Leahey, A.; Lewis, S. E.; Lloyd, P.; Lochovsky, L.; Lowdon, R. F.; Lubling, Y.; Lyne, R.; MacCoss, M.; Mackowiak, S. D.; Mangone, M.; McKay, S.; Mecenas, D.; Merrihew, G.; Miller, D. M.; Muroyama, A.; Murray, J. I.; Ooi, S.-L.; Pham, H.; Phippen, T.; Preston, E. A.; Rajewski, N.; Rätsch, G.; Rosenbaum, H.; Rozowksy, J.; Rutherford, K.; Ruzanov, P.; Sarov, M.; Sasidharan, R.; Sboner, A.; Scheid, P.; Segal, E.; Shin, H.; Shou, C.; Slack, F. J.; Slightham, C.; Smith, R.; Spencer, W. C.; Stinson, E. O.; Taing, S.; Takasaki, T.; Vafeados, D.; Voronina, K.; Wang, G.; Washington, N. L.; Whittle, C. M.; Wu, B.; Yang, K.-K.; Zeller, G.; Zha, Z.; Zhong, M.; Zhou, X.; Ahringer, J.; Strome, S.; Gunsalus, K. C.; Micklem, G.; Liu, X. S.; Reinke, V.; Kim, S. K.; Hillier, L. W.; Henikoff, S.; Piano, F.; Snyder, M.; Stein, L.; Lieb, J. D.; Waterston, R. H.: Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science 330 (6012), pp. 1775 - 1787 (2010)

Hegler, F.; Schmidt, C.; Schwarz, H.; Kappler, A.: Does a low-pH microenvironment around phototrophic FeII-oxidizing bacteria prevent cell encrustation by FeIII minerals? FEMS Microbiology Ecology 74 (3), pp. 592 - 600 (2010)

Huntzinger, E.; Braun, J.; Heimstädt, S.; Zekri, L.; Izaurralde, E.: Two PABPC1-binding sites in GW182 proteins promote miRNA-mediated gene silencing. EMBO Journal 29 (24), pp. 4146 - 4160 (2010)

Thein, M.; Sauer, G.; Grin, I.; Paramasivam, N.; Linke, D.: Efficient subfractionation of gram-negative bacteria for proteomics studies. Journal of Proteome Research 9 (12), pp. 6135 - 6147 (2010)

Wahl, V.; Brand, L.; Guo, Y.-L.; Schmid, M.: The FANTASTIC FOUR proteins influence shoot meristem size in Arabidopsis thaliana. BMC Plant Biology 10, 285 (2010)

Weller, A.: The wet plate protocol: an efficient way to obtain dauer larvae. The Worm Breeder’s Gazette 18 (3) (2010)

Zhang, H.; Han, W.; De Smet, I.; Talboys, P.; Loya, R.; Hassan, H.; Rong, H.; Jürgens, G.; Knox, J.; Wang, M.-H.: ABA promotes quiescence of the quiescent centre and suppresses stem cell differentiation in the Arabidopsis primary root meristem. The Plant Journal 64 (5), pp. 764 - 774 (2010)

Armache, J.; Jarasch, A.; Anger, A.; Villa, E.; Becker, T.; Bhushan, S.; Jossinet, F.; Habeck, M.; Dindar, G.; Franckenberg, S. et al.; Marquez, V.; Mielke, T.; Thomm, M.; Berninghausen, O.; Beatrix, B.; Soeding, J.; Westhof, E.; Wilson, D.; Beckmann, R.: Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome. Proceedings of the National Academy of Sciences of the United States of America 107 (46), pp. 19754 - 19759 (2010)

Armache, J.-P.; Jarasch, A.; Anger, A.; Villa, E.; Becker, T.; Bhushan, S.; Jossinet, F.; Habeck, M.; Dindar, G.; Franckenberg , S. et al.; Marguez, V.; Mielke, T.; Thomm, M.; Berninghausen, O.; Beatrix, B.; Soeding, J.; Westhof, E.; Wilson, D.; Beckmann, R.: Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-Å resolution. Proceedings of the National Academy of Sciences of the United States of America 107 (46), pp. 19748 - 19753 (2010)

Fokina, O.; Chellamuthu, V.-R.; Forchhammer, K.; Zeth, K.: Mechanism of 2-oxoglutarate signaling by the Synechococcus elongatus PII signal transduction protein. Proceedings of the National Academy of Sciences of the United States of America 107 (46), pp. 19760 - 19765 (2010)

Kashima, I.; Jonas, S.; Jayachandran, U.; Buchwald, G.; Conti, E.; Lupas, A.; Izaurralde, E.: SMG6 interacts with the exon junction complex via two conserved EJC-binding motifs (EBMs) required for nonsense-mediated mRNA decay. Genes and Development 24 (21), pp. 2440 - 2450 (2010)

Kintscher, C.; Wuertenberger, S.; Eylenstein, R.; Uhlendorf, T.; Groemping, Y.: Autoinhibition of GEF activity in Intersectin 1 is mediated by the short SH3-DH domain linker. Protein Science 19 (11), pp. 2164 - 2174 (2010)

Lehr, U.; Schütz, M.; Oberhettinger, P.; Ruiz-Perez, F.; Donald, J.; Palmer, T.; Linke, D.; Henderson, I.; Autenrieth, I.: C-terminal amino acid residues of the trimeric autotransporter adhesin YadA of Yersinia enterocolitica are decisive for its recognition and assembly by BamA. Molecular Microbiology 78 (4), pp. 932 - 946 (2010)

Rae, R.; Iatsenko, I.; Witte, H.; Sommer, R.: A subset of naturally isolated Bacillus strains show extreme virulence to the free‐living nematodes Caenorhabditis elegans and Pristionchus pacificus. Environmental Microbiology 12 (11), pp. 3007 - 3021 (2010)

Salomé, P.; Weigel, D.; McClung, R.: The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation. Plant Cell 22 (11), pp. 3650 - 3661 (2010)

Stein, D.; Charatsi, I.; Cho, Y.; Zhang, Z.; Nguyen, J.; DeLotto, R.; Luschnig, S.; Moussian, B.: Localization and activation of the Drosophila protease easter require the ER-resident saposin-like protein seele. Current Biology 20 (21), pp. 1953 - 1958 (2010)

Varnay, I.; Truffault, V.; Djuranovic, S.; Ursinus, A.; Coles, M.; Kessler, H.: Optimized measurement temperature gives access to the solution structure of a 49 kDa homohexameric β-propeller. Journal of the American Chemical Society 132 (44), pp. 15692 - 15698 (2010)

Wollmann, H.; Mica, E.; Todesco, M.; Long, J.; Weigel, D.: On reconciling the interactions between APETALA2, miR172 and AGAMOUS with the ABC model of flower development. Development 137 (21), pp. 3633 - 3642 (2010)

Camps-Valls, G.; Shervashidze, N.; Borgwardt, K.: Spatio-Spectral Remote Sensing Image Classification With Graph Kernels. IEEE Geoscience and Remote Sensing Letters 7 (4), pp. 741 - 745 (2010)