Publications of the Institute

Costea, P.; Hildebrand, F.; Arumugam, M.; Backhed, F.; Blaser, M.; Bushman, F.; de Vos, W.; Ehrlich, S.; Fraser, C.; Hattori, M. et al.; Huttenhower, C.; Jeffery, I.; Knights, D.; Lewis, J.; Ley, R.; Ochman, H.; O'Toole, P.; Quince, C.; Relman, D.; Shanahan, F.; Sunagawa, S.; Wang, J.; Weinstock, G.; Wu, G.; Zeller, G.; Zhao, L.; Raes, J.; Knight, R.; Bork, P.: Enterotypes in the landscape of gut microbial community composition. Nature Microbiology 3 (1), pp. 8 - 16 (2017)

Emmett, B.; Youngblut, N.; Buckley, D.; Drinkwater, L.: Plant Phylogeny and Life History Shape Rhizosphere Bacterial Microbiome of Summer Annuals in an Agricultural Field. Frontiers in Microbiology 8, 2414 (2017)

Kerbl, A.; Conzelmann, M.; Jékely, G.; Worsaae, K.: High diversity in neuropeptide immunoreactivity patterns among three closely related species of Dinophilidae (Annelida). The Journal of Comparative Neurology 525 (17), pp. 3596 - 3635 (2017)

Levy, A.; Salas Gonzalez, I.; Mittelviefhaus, M.; Clingenpeel, S.; Herrera Paredes, S.; Miao, J.; Wang, K.; Devescovi, G.; Stillman, K.; Monteiro, F. et al.; Rangel Alvarez, B.; Lundberg, D.; Lu, T.; Lebeis, S.; Jin, Z.; McDonald, M.; Klein, A.; Feltcher, M.; Rio, T.; Grant, S.; Doty, S.; Ley, R.; Zhao, B.; Venturi, V.; Pelletier, D.; Vorholt, J.; Tringe, S.; Woyke, T.; Dangl, J.: Genomic features of bacterial adaptation to plants. Nature Genetics 50 (1), pp. 138 - 150 (2017)

Moreno, E.; Sieriebriennikov, B.; Witte, H.; Rödelsperger, C.; Lightfoot, J.; Sommer, R.: Regulation of hyperoxia-induced social behaviour in Pristionchus pacificus nematodes requires a novel cilia-mediated environmental input. Scientific Reports 7, 17550 (2017)

Riebesell, M.; Sommer, R.: Three-dimensional reconstruction of the pharyngeal gland cells in the predatory nematode Pristionchus pacificus. Journal of Morphology 278 (12), pp. 1656 - 1666 (2017)

Schärfe, C.; Tremmel, R.; Schwab, M.; Kohlbacher, O.; Marks, D.: Genetic variation in human drug-related genes. Genome Medicine 9, 117 (2017)

Williams, E.; Verasztó, C.; Jasek, S.; Conzelmann, M.; Shahidi, R.; Bauknecht, P.; Mirabeau, O.; Jékely, G.: Synaptic and peptidergic connectome of a neurosecretory center in the annelid brain. eLife 6, e26349 (2017)

Capovilla, G.; Symeonidi, E.; Wu, R.; Schmid, M.: Contribution of major FLM isoforms to temperature-dependent flowering in Arabidopsis thaliana. Journal of Experimental Botany 68 (18), pp. 5117 - 5127 (2017)

Flett, F.; Sachsenberg, T.; Kohlbacher, O.; Mackay, C.; Interthal, H.: Differential Enzymatic O-16/O-18 Labeling for the Detection of Cross-Linked Nucleic Acid-Protein Heteroconjugates. Analytical Chemistry 89 (21), pp. 11208 - 11213 (2017)

Goodrich, J.; Davenport, E.; Clark, A.; Ley, R.: The Relationship Between the Human Genome and Microbiome Comes into View. Annual Review of Genetics 51, pp. 413 - 433 (2017)

Lazzaretti, D.; Bono, F.: mRNA localization in metazoans: A structural perspective. RNA Biology 14 (11), pp. 1473 - 1484 (2017)

Mao, H.; Aryal, B.; Langenecker, T.; Hagmann, J.; Geisler, M.; Grebe, M.: Arabidopsis BTB/POZ protein-dependent PENETRATION3 trafficking and disease susceptibility. Nature Plants 3 (11), pp. 854 - 858 (2017)

Okumura, M.; Wilecki, M.; Sommer, R.: Serotonin Drives Predatory Feeding Behavior via Synchronous Feeding Rhythms in the Nematode Pristionchus pacificus. G3: Genes, Genomes, Genetics 7 (11), pp. 3745 - 3755 (2017)

Pfeuffer, J.; Sachsenberg, T.; Alka, O.; Walzer, M.; Fillbrunn, A.; Nilse, L.; Schilling, O.; Reinert, K.; Kohlbacher, O.: OpenMS: A platform for reproducible analysis of mass spectrometry data. Journal of Biotechnology 261, pp. 142 - 148 (2017)

Schuster, H.; Peper, J.; Boesmueller, H.-C.; Röhle, K.; Backert, L.; Bilich, T.; Ney, B.; Loeffler, M.; Kowalewski, D.; Trautwein, N. et al.; Rabsteyn, A.; Engler, T.; Braun, S.; Haen, S.; Walz, J.; Schmid-Horch, B.; Brucker, S.; Wallwiener, D.; Kohlbacher, O.; Fend, F.; Rammensee, H.-G.; Stevanovic, S.; Staebler, A.; Wagner, P.: The immunopeptidomic landscape of ovarian carcinomas. Proceedings of the National Academy of Sciences of the United States of America 114 (46), pp. E9942 - E9951 (2017)

Sepulveda, E.; Lupas, A.: Characterization of the CrbS/R Two-Component System in Pseudomonas fluorescens Reveals a New Set of Genes under Its Control and a DNA Motif Required for CrbR-Mediated Transcriptional Activation. Frontiers in Microbiology 8, 2287 (2017)

Slane, D.; Reichardt, I.; El Kasmi, F.; Bayer, M.; Jürgens, G.: Evolutionarily diverse SYP1 Qa-SNAREs jointly sustain pollen tube growth in Arabidopsis. The Plant Journal 92 (3), pp. 375 - 385 (2017)

Chevrette, M.; Aicheler, F.; Kohlbacher, O.; Currie, C.; Medema, M.: SANDPUMA: ensemble predictions of nonribosomal peptide chemistry reveal biosynthetic diversity across Actinobacteria. Bioinformatics 33 (20), pp. 3202 - 3210 (2017)

Fraga, H.; Arnaud, C.-A.; Gauto, D.; Audin, M.; Kurauskas, V.; Macek, P.; Krichel, C.; Guan, J.-Y.; Boisbouvier, J.; Sprangers, R. et al.; Breyton, C.; Schanda, P.: Solid-State NMR H-N-(C)-H and H-N-C-C 3D/4D Correlation Experiments for Resonance Assignment of Large Proteins. ChemPhysChem 18 (19), pp. 2697 - 2703 (2017)