Publications of the Institute

Vigneau, J.; Martinho, C.; Godfroy, O.; Zheng, M.; Haas, F.; Borg, M.; Coelho, S.: Interactions between U and V sex chromosomes during the life cycle of Ectocarpus. Development 151 (20), dev202677 (2024)

Aubel, M.; Buchel, F.; Heames, B.; Jones, A.; Honc, O.; Bornberg-Bauer, E.; Hlouchova, K.: High-throughput selection of human de novo-emerged sORFs with high folding potential. Genome Biology and Evolution Epub ahead (2024)

Dorner, L.; Stratmann, B.; Bader, L.; Podobnik, M.; Irion, U.: Efficient genome editing using modified Cas9 proteins in zebrafish. Biology Open 13 (4), bio060401 (2024)

Ferguson, S.; Jones, A.; Murray, K.; Andrew, S.; Schwessinger, B.; Borevitz, J.: Plant genome evolution in the genus Eucalyptus driven by structural rearrangements that promote sequence divergence. Genome Research Epub ahead (2024)

Idiiatullina, S.; Nguyen, T.; Pawangkhanant, P.; Suwannapoom, C.; Chanhome, L.; Mirza, Z.; David, P.; Vogel, G.; Poyarkov, N.: An integrative taxonomic revision of the Trimeresurus popeiorum group of pitvipers (Reptilia: Serpentes: Viperidae) with descriptions of two new species from the Indo-Burma Biodiversity Hotspot. Vertebrate Zoology 4, pp. 303 - 342 (2024)

Maier, L.; Stein-Thoeringer, C.; Ley, R.; Brötz-Oesterhelt, H.; Link, H.; Ziemert, N.; Wagner, S.; Peschel, A.: Integrating research on bacterial pathogens and commensals to fight infections-an ecological perspective. The Lancet Microbe Epub ahead (2024)

Mantovani, O.; Haffner, M.; Walke, P.; Elshereef, A.; Wagner, B.; Petras, D.; Forchhammer, K.; Selim, K.; Hagemann, M.: The redox-sensitive R-loop of the carbon control protein SbtB contributes to the regulation of the cyanobacterial CCM. Scientific Reports 14 (1), 7885 (2024)

Ortiz-Ardila, A.; Celis, C.; Usack, J.; Angenent, L.; Labatut, R.: Microaeration promotes volatile siloxanes conversion to methane and simpler monomeric products. Bioresource Technology Epub ahead, 130673 (2024)

Röhl, A.; Netz, E.; Kohlbacher, O.; Elhabashy, H.: CLAUDIO: Automated structural analysis of cross-linking data. Bioinformatics 40 (4), btae146 (2024)

Shah, K.; He, S.; Turner, D.; Corbo, J.; Rebbani, K.; Dominguez, D.; Bateman, D.; Cheloufi, S.; Igreja, C.; Valkov, E. et al.; Murn, J.: Regulation by the RNA-binding protein Unkempt at its effector interface. Nature Communications 15 (1), 3159 (2024)

Shevalev, O.; Bischof, L.; Sapegin, A.; Bunev, A.; Grigoreva, O.; Kantin , G.; Kalinin, S.; Hartmann, M.: Discovery and characterization of potent spiro-isoxazole-based cereblon ligands with a novel binding mode. European Journal of Medicinal Chemistry 270, 116328 (2024)

Wighard, S.; Witte, H.; Sommer, R.: Conserved switch genes that arose via whole-genome duplication regulate a cannibalistic nematode morph. Science Advances 10 (15), eadk6062 (2024)

Barragan, A.; Collenberg, M.; Schwab, R.; Kersten, S.; Kerstens, M.; Požárová, D.; Bezrukov, I.; Bemm, F.; Kolár, F.; Weigel, D.: Deleterious Phenotypes in Wild Arabidopsis arenosa Populations Are Common and Linked to Runs of Homozygosity. G3: Genes, Genomes, Genetics 14 (3), jkad290 (2024)

Coelho, S.: The brown seaweed Ectocarpus. Nature Methods 21 (3), pp. 363 - 364 (2024)

Colombi, E.; Bertels, F.; Doulcier, G.; McConnell, E.; Pichugina, T.; Sohn, K.; Straub, C.; McCann, H.; Rainey, P.: Rapid dissemination of host metabolism-manipulating genes via integrative and conjugative elements. PNAS 121 (11), e2309263121 (2024)

Drost, H.-G.: How ancient genes form animal body plans. Nature Reviews Genetics Epub ahead (2024)

Jung, J.; Loschko, T.; Reich, S.; Rassoul-Agha, M.; Werner, M.: Newly identified nematodes from the Great Salt Lake are associated with microbialites and specially adapted to hypersaline conditions. Proceedings of the Royal Society B: Biological Sciences 291 (2018), 20232653 (2024)

Kar, A.; Ghosh, P.; Gautam, A.; Chowdhury, S.; Basak, D.; Sarkar, I.; Bhoumik, A.; Barman, S.; Chakraborty, P.; Mukhopadhyay, A. et al.; Mehrotra, S.; Ganesan, S.; Paul, S.; Chatterjee, S.: CD38-RyR2 axis-mediated signaling impedes CD8+ T cell response to anti-PD1 therapy in cancer. PNAS 121 (11), e2315989121 (2024)

Luthringer, R.; Raphalen, M.; Guerra, C.; Colin, S.; Martinho, C.; Zheng, M.; Hoshino, M.; Badis, Y.; Lipinska, A.; Haas, F. et al.; Barrera-Redondo, J.; Alva, V.; Coelho, S.: Repeated co-option of HMG-box genes for sex determination in brown algae and animals. Science 283 (6689), eadk5466 (2024)

Murray, K.; Borevitz, J.; Weigel, D.; Warthmann, N.: Acanthophis: a comprehensive plant hologenomics pipeline. The Journal of Open Source Software (JOSS) 9 (95), 6062 (2024)