Publikationen von RA Neher
Alle Typen
Zeitschriftenartikel (35)
1.
Zeitschriftenartikel
6 (2), veaa066 (2020)
Efficient inference, potential, and limitations of site-specific substitution models. Virus Evolution 2.
Zeitschriftenartikel
34 (23), S. 4121 - 4123 (2018)
Nextstrain: real-time tracking of pathogen evolution. Bioinformatics 3.
Zeitschriftenartikel
46 (1), e5 (2018)
panX: pan-genome analysis and exploration. Nucleic Acids Research (London) 4.
Zeitschriftenartikel
4 (1), vex042 (2018)
TreeTime: Maximum-likelihood phylodynamic analysis. Virus Evolution 5.
Zeitschriftenartikel
13 (10), e1005775 (2017)
Estimating time of HIV-1 infection from next-generation sequence diversity. PLoS Computational Biology 6.
Zeitschriftenartikel
61 (9), e00043-17 (2017)
Rapid and Consistent Evolution of Colistin Resistance in Extensively Drug-Resistant Pseudomonas aeruginosa during Morbidostat Culture. Antimicrobial Agents and Chemotherapy 7.
Zeitschriftenartikel
239, S. 106 - 114 (2017)
Error rates, PCR recombination, and sampling depth in HIV-1 whole genome deep sequencing. Virus Research 8.
Zeitschriftenartikel
8, 15120 (2017)
Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering. Nature Communications 9.
Zeitschriftenartikel
3 (1), vex003 (2017)
In vivo mutation rates and the landscape of fitness costs of HIV-1. Virus Evolution 10.
Zeitschriftenartikel
21 (12), S. 1752 - 1767 (2016)
Revisiting adult neurogenesis and the role of erythropoietin for neuronal and oligodendroglial differentiation in the hippocampus. Molecular Psychiatry 11.
Zeitschriftenartikel
12 (11), e1005964 (2016)
HIV Cell-to-Cell Spread Results in Earlier Onset of Viral Gene Expression by Multiple Infections per Cell. PLoS Pathogens 12.
Zeitschriftenartikel
5, e18889 (2016)
Establishment and stability of the latent HIV-1 DNA reservoir. eLife 13.
Zeitschriftenartikel
113 (12), S. E1701 - E1709 (2016)
Prediction, dynamics, and visualization of antigenic phenotypes of seasonal influenza viruses. Proceedings of the National Academy of Sciences of the United States of America 14.
Zeitschriftenartikel
4, e11282 (2015)
Population genomics of intrapatient HIV-1 evolution. eLife 15.
Zeitschriftenartikel
31 (21), S. 3546 - 3548 (2015)
nextflu: real-time tracking of seasonal influenza virus evolution in humans. Bioinformatics 16.
Zeitschriftenartikel
10 (3), e0119123 (2015)
Challenges with using primer IDs to improve accuracy of next generation sequencing. PLoS One 17.
Zeitschriftenartikel
3, e03568 (2014)
Predicting evolution from the shape of genealogical trees. eLife 18.
Zeitschriftenartikel
196 (4), S. 1153 - 1165 (2014)
Characterization of genetic diversity in the nematode Pristionchus pacificus from population-scale resequencing data. Genetics 19.
Zeitschriftenartikel
10 (3), e1004222 (2014)
Genetic diversity in the interference selection limit. PLoS Genetics 20.
Zeitschriftenartikel
126 (23), S. 5453 - 5464 (2013)
Quantifying the range of a lipid phosphate signal in vivo. Journal of Cell Science