Publikationen von O Kohlbacher

Weidmann, L.; Dijkstra, T.; Kohlbacher, O.; Lupas, A.: The Power of Reuse in the Evolution of natural Proteins. In 4th Symposium on Non-Globular Proteins (NGP-NET 2018), O23, S. 31. 4th Symposium on Non-Globular Proteins (NGP-NET 2018), Druskininkai, Lithuania, 12. September 2018 - 14. September 2018. (2018)

Stuetzer, A.; Chernev, A.; Sachsenberg, T.; Tauber, M.; Fischle, W.; Kohlbacher, O.: Protein-DNA Interactions Analyzed by Cross-Linking of Recombinant and Native Chromatin Samples. In 66th ASMS Conference on Mass Spectrometry and Allied Topics. 66th ASMS Conference on Mass Spectrometry and Allied Topics, San Diego, CA, USA, 03. Juni 2018 - 07. Juni 2018. (2018)

Stützer, A.; Kappert, C.; Chernev, A.; Mucek, K.; Kramer, K.; Sachsenberg, T.; Kohlbacher, O.: Mass Spectrometric Analysis of UV and Chemical protein-DNA Cross-links in a Chromatin Model. In 65th ASMS Conference on Mass Spectrometry and Allied Topics. 65th ASMS Conference on Mass Spectrometry and Allied Topics, Indianapolis, IN, USA, 04. Juni 2017 - 08. Juni 2017. (2017)

Schultheiss, S.; Busch, W.; Lohmann, J.; Kohlbacher, O.; Rätsch, G.: KIRMES: kernel-based identification of regulatory modules in euchromatic sequences. In BMC Bioinformatics, 10 (Supplement 13), O1. 5th International Society for Computational Biology Student Council (ISCB 2009) at the Symposium at the 17th Annual International Conference on Intelligent Systems for Molecular Biology and the 8th European Conference on Computational Biology, Stockholm, Sweden, 27. Juni 2009. BioMed Central (2009)

Elhabashy, H.; Netz, E.; Kohlbacher, O.: XLEC: Large-scale prediction and modeling of protein-protein interaction using sequence co-evolution and cross-linking data. 11th Symposium on Structural Proteomics (SSP 2023), Utrecht, The Netherlands (2023)

Kohlbacher, O.: From Omics Data to Therapies: Personalizing Treatments. German Conference on Bioinformatics (GCB 2019), Heidelberg, Germany (2019)

Röhl, A.; Netz, E.; Kohlbacher, O.; Elhabashy, H.: CLAUDIO: An automated cross-linking data analysis and validation workflow. 11th Symposium on Structural Proteomics (SSP 2023), Utrecht, The Netherlands (2023)

Netz, E.; Dijkstra, T.; Sachsenberg, T.; Kohlbacher, O.: OpenPepXL: An open-source tool for sensitive identification of cross-linked peptides in XL-MS. 68th ASMS Conference on Mass Spectrometry and Allied Topics (2020)

Elhabashy, H.; Kohlbacher, O.: Cross-Linking Mass Spectrometry and Evolutionary Couplings: A Hybrid Approach for Interaction Prediction and Structure Elucidation of Protein- Protein Complexes. 9th Symposium on Structural Proteomics (9SSP), Göttingen, Germany (2019)

Sürün, B.; Schärfe, C.; Divine, M.; Heinrich, J.; Toussaint, N.; Zimmermann, L.; Beha, J.; Kohlbacher, O.: ClinVAP: A Reporting strategy from variants to therapeutic options. German Conference on Bioinformatics (GCB 2019), Heidelberg, Germany (2019)

Bichmann, L.; Nelde, A.; Ghosh, M.; Sachsenberg, T.; Mohr, C.; Peltzer, A.; Kuchenbecker, A.; Walz, J.; Stevanović, S.; Rammensee, H.-G. et al.; Kohlbacher, O.: MHCquant: Automated and Reproducible Data Analysis for Immunopeptidomics. 67th ASMS Conference on Mass Spectrometry and Allied Topics, Atlanta, GA, USA (2019)

Jeong, K.; Kim, J.; Gaikwad, M.; Hidaya, S.; Schlüter, H.; Kohlbacher, O.: FLASHDeconv: Ultra-Fast High-Quality Deconvolution Enables Online Processing of Top-Down MS Data. 67th ASMS Conference on Mass Spectrometry and Allied Topics, Atlanta, GA, USA (2019)

Netz, E.; Dijkstra, T.; Sachsenberg, T.; Kohlbacher, O.: OpenPepXL: Sensitive, Comprehensive Identification and Quantification of Protein-Protein Cross-Links. 67th ASMS Conference on Mass Spectrometry and Allied Topics, Atlanta, GA, USA (2019)

Netz, E.; Dijkstra, T.; Kohlbacher, O.: OpenPepXL: a versatile and sensitive XL-MS identification tool. 8th Symposium on Structural Proteomics (8SSP), Berlin, Germany (2018)

Weidmann, L.; Dijkstra, T.; Kohlbacher, O.; Lupas, A.: The prevalence of conservative evolution in the protein sequence universe. CAS Conference 2018: Molecular Origins of LIFE, München, Germany (2018)

Netz, E.; Dijkstra, T.; Kohlbacher, O.: OpenPepXL: a Versatile and Sensitive XL-MS Identification Tool. 66th ASMS Conference on Mass Spectrometry and Allied Topics, San Diego, CA, USA (2018)

Dijkstra, T.; Sachsenberg, T.; Kohlbacher, O.: Imputation of Missing Data in Quantitative Proteomics using Singular Value Thresholding. 65th ASMS Conference on Mass Spectrometry and Allied Topics, Indianapolis, IN, USA (2017)

Netz, E.; Sachsenberg, T.; Gloeckner, C.; Kohlbacher, O.: OpenProXL: a Fast and Versatile XL-MS Identification Tool. 65th ASMS Conference on Mass Spectrometry and Allied Topics, Indianapolis, IN, USA (2017)

Sachsenberg, T.; Veit, J.; Chernev, A.; Sharma, K.; Hofele, R.; Qamar, S.; Zaman, U.; Kappert, C.; Kramer, K.; Pfeuffer, J. et al.; Liang, X.; Reinert, K.; Lenz, C.; Urlaub, H.; Kohlbacher, O.: RNPxl 2 - Protein-RNA Interaction Site Localization from UV Cross-linked Peptide-RNA Oligonucleotides in Proteome Discoverer 2.1. 64th ASMS Conference on Mass Spectrometry and Allied Topics, San Antonio, TX, USA (2016)

Malisi, C.; Höcker, B.; Kohlbacher, O.: Automated scaffold selection in enzyme design. 17th Annual International Conference on Intelligent Systems for Molecular Biology & 8th European Conference on Computational Biology (ISMB ECCB 2009), Stockholm, Sweden (2009)