Rubio-Somoza, I.; Weigel, D.: Coordination of flower maturation by a regulatory circuit of three microRNAs. PLoS Genetics 9 (3), e1003374 (2013)

Grimm, D.; Hagmann, J.; Koenig, D.; Weigel, D.; Borgwardt, K.: Accurate indel prediction using paired-end short reads. BMC Genomics 14, 132 (2013)

Kopischke, M.; Westphal, L.; Schneeberger, K.; Clark, R.; Ossowski, S.; Wewer, V.; Fuchs, R.; Landtag, J.; Hause, G.; Doermann, P. et al.; Lipka, V.; Weigel, D.; Schulze-Lefert, P.; Scheel, D.; Rosahl, S.: Impaired sterol ester synthesis alters the response of Arabidopsis thaliana to Phytophthora infestans. The Plant Journal 73 (3), pp. 456 - 468 (2013)

Manavella, P.; Koenig, D.; Rubio-Somoza, I.; Burbano, H.; Becker, C.; Weigel, D.: Tissue-specific silencing of Arabidopsis SU(VAR)3-9 HOMOLOG8 by miR171a. Plant Physiology 161 (2), pp. 805 - 812 (2013)

Salomé, P.; Oliva, M.; Weigel, D.; Krämer, U.: Circadian clock adjustment to plant iron status depends on chloroplast and phytochrome function. EMBO Journal 32 (4), pp. 511 - 523 (2013)

Wahl, V.; Ponnu, J.; Schlereth, A.; Arrivault, S.; Langenecker, T.; Franke, A.; Feil, R.; Lunn, J.; Stitt, M.; Schmid, M.: Regulation of Flowering by Trehalose-6-Phosphate Signaling in Arabidopsis thaliana. Science 339 (6120), pp. 704 - 707 (2013)

Wang, X.; Weigel, D.; Smith, L.: Transposon variants and their effects on gene expression in Arabidopsis. PLoS Genetics 9 (2), e1003255 (2013)

Rakitsch, B.; Lippert, C.; Stegle, O.; Borgwardt, K.: LMM-Lasso: A Lasso Multi-Marker Mixed Model for Association Mapping with Population Structure Correction. Bioinformatics 29 (2), pp. 206 - 214 (2013)

Rosloski, S.; Singh, A.; Jali, S.; Balasubramanian, S.; Weigel, D.; Grbic, V.: Functional analysis of splice variant expression of MADS AFFECTING FLOWERING 2 of Arabidopsis thaliana. Plant Molecular Biology 81 (1-2), pp. 57 - 69 (2013)

Warthmann, N.; Ossowski, S.; Schwab, R.; Weigel, D.: Artificial microRNAs for specific gene silencing in rice. In: Methods in Molecular Biology, Vol. 956. Springer, US (2013)

Azencott, C.-A.; Grimm, D.; Kawahara, Y.; Borgwardt, K.: A min-cut solution to mapping phenotypes to networks of genetic markers. In: 17th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2013). 17th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2013), Beijing, China, April 07, 2013 - April 10, 2013. (submitted)

Feragen, A.; Owen, M.; Petersen, J.; Wille, M.; Thomsen, L.; Dirksen, A.; de Bruijne, M.: Tree-Space Statistics and Approximations for Large-Scale Analysis of Anatomical Trees. In: Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28-July 3, 2013, pp. 74 - 85 (Eds. Gee, J.; Joshi, S.; Pohl, K.; Wells, W.; Zöllei, L.). 23rd International Conference on Information Processing in Medical Imaging (IPMI 2013), Asilomar, CA, USA, June 28, 2013 - July 03, 2013. Springer, Berlin, Germany (2013)

Feragen, A.; Petersen, J.; Grimm, D.; Dirksen, A.; Pedersen, J.; Borgwardt, K.; Bruijne, M.: Geometric tree kernels: Classification of COPD from airway tree geometry. In: Information Processing in Medical Imaging, pp. 171 - 183 (Eds. Gee, J.; Joshi, S.). 23rd International Conference on Information Processing in Medical Imaging (IPMI 2013), Asilomar, CA, USA, June 28, 2013 - July 03, 2013. Springer, Berlin, Germany (2013)

Morris, Q.; Brenner, S.; Listgarten, J.; Stegle, O.: The future of genome-based medicine. In: Biocomputing 2013: Pacific Symposium on Biocomputing, pp. 456 - 458 (Eds. Altman, R.; Dunker, A.; Hunter, L.; Murray, T.; Klein, T.). Pacific Symposium on Biocomputing (PSB 2013), Kohala Coast, HI, USA, January 03, 2013 - January 07, 2013. World Scientific Publishing Company, Singapore (2013)

Sugiyama, M.; Borgwardt, K.: Measuring Statistical Dependence via the Mutual Information Dimension. In: Twenty-Third International Joint Conference on Artificial Intelligence (IJCAI 2013 ), pp. 1692 - 1698 (Ed. Rossi, F.). Twenty-Third International Joint Conference on Artificial Intelligence (IJCAI 2013 ), Beijing, China, August 03, 2013 - August 09, 2013. AAAI Press, Menlo Park, CA, USA (2013)

Azencott, C.-A.; Grimm, D.; Sugiyama, M.; Kawahara, Y.; Borgwardt, K.: Efficient network-guided multi-locus association mapping with graph cuts. In MLSB13: Seventh Workshop on Machine Learning in Systems Biology, p. 31. Seventh Workshop on Machine Learning in Systems Biology (MLSB 2013) at the 21st Annual International Conference on Intelligent Systems in Molecular Biology (ISMB), Berlin, Germany, July 19, 2013 - July 20, 2013. (2013)

Casale, F.; Rakitsch, B.; Lippert, C.; Stegle, O.: A mixed-model approach for association studies of multiple variants to a set of correlated traits. In MLSB13: Seventh Workshop on Machine Learning in Systems Biology, p. 33. Seventh Workshop on Machine Learning in Systems Biology (MLSB 2013) at the 21st Annual International Conference on Intelligent Systems in Molecular Biology (ISMB), Berlin, Germany, July 19, 2013 - July 20, 2013. (2013)

Lange, A.; Beyer, S.; Huson, D.; Henz, S.; Hantke, K.; Lanz, C.; Autenrieth, I.; Frick, J.: Different Survival Strategies of Gut Commensal Bacteria in IBD. In 6th Seeon Conference: Microbiota, Probiota and Host, 13, p. 57. 6th Seeon Conference: Microbiota, Probiota and Host, Seeon, Germany, June 28, 2013 - June 30, 2013. (2013)

Smith, L.; Burbano, H.; Wang, X.; Fitz, J.; Ural, Y.; Weigel, D.: miRNA evolution in the Camelineae. In 24th International Conference on Arabidopsis Research (ICAR 2013), WORK-05-01, p. 43. 24th International Conference on Arabidopsis Research (ICAR 2013), Sydney, Australia, June 24, 2013 - June 28, 2013. (2013)

Wahl, V.; Ponnu, J.; Schlereth, S.; Arrivault, S.; Langenecker, T.; Feil, R.; Lunn, J.; Stitt, M.; Schmid, M.: Regulation of flowering by Trehalose-6-phosphate signalling. In 24th International Conference on Arabidopsis Research (ICAR 2013), SYM-18-03, p. 34. 24th International Conference on Arabidopsis Research (ICAR 2013), Sydney, Australia, June 24, 2013 - June 28, 2013. (2013)