Journal Article (475)

61.
Journal Article
Fuchs, A.: Specific, sensitive and quantitative protein detection by in-gel fluorescence. Nature Communications 14 (1), 2505 (2023)
62.
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Böhning, J.; Dobbelstein, A.; Sulkowski, N.; Eilers, K.; von Kügelgen, A.; Tarafder, A.; Peak-Chew, S.-Y.; Skehel, M.; Alva, V.; Filloux, A. et al.; Bharat, T.: Architecture of the biofilm-associated archaic Chaperone-Usher pilus CupE from Pseudomonas aeruginosa. PLoS Pathogens 19 (4), e1011177 (2023)
63.
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Heames, B.; Buchel, F.; Aubel, M.; Tretyachenko, V.; Loginov, D.; Novák, P.; Lange, A.; Bornberg-Bauer, E.; Hlouchová, K.: Experimental characterization of de novo proteins and their unevolved random-sequence counterparts. Nature Ecology & Evolution 7 (4), pp. 570 - 580 (2023)
64.
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Iyengar, B.; Bornberg-Bauer, E.: Neutral models of de novo gene emergence suggest that gene evolution has a preferred trajectory. Molecular Biology and Evolution 40 (4), msad079 (2023)
65.
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von Kügelgen, A.; van Dorst, S.; Yamashita, K.; Sexton, D.; Tocheva, E.; Murshudov, G.; Alva, V.; Bharat, T.: Interdigitated immunoglobulin arrays form the hyperstable surface layer of the extremophilic bacterium Deinococcus radiodurans. Proceedings of the National Academy of Sciences of the United States of America 120 (16), e2215808120 (2023)
66.
Journal Article
Aubel, M.; Eicholt, L.; Bornberg-Bauer, E.: Assessing structure and disorder prediction tools for de novo emerged proteins in the age of machine learning. F1000Research (2023)
67.
Journal Article
Kuchta, R.; Heim, C.; Herrmann, A.; Maiwald, S.; Ng, Y.; Sosič, I.; Keuler, T.; Krönke, J.; Gütschow, M.; Hartmann, M. et al.; Steinebach, C.: Accessing three-branched high-affinity cereblon ligands for molecular glue and protein degrader design. RSC Chemical Biology 4 (3), pp. 229 - 234 (2023)
68.
Journal Article
Aubel, M.; Bornberg-Bauer, E.: Introducing creative destruction as a mechanism in protein evolution. Proceedings of the National Academy of Sciences of the United States of America 120 (6), e2220460120 (2023)
69.
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Mantovani, O.; Haffner, M.; Selim, K.; Hagemann, M.; Forchhammer, K.: Roles of second messengers in the regulation of cyanobacterial physiology: the carbon-concentrating mechanism and beyond. microLife 4, uqad008 (2023)
70.
Journal Article
Selim, K.; Haffner, M.; Mantovani, O.; Albrecht, R.; Zhu, H.; Hagemann, M.; Forchhammer, K.; Hartmann, M.: Carbon signaling protein SbtB possesses atypical redox-regulated apyrase activity to facilitate regulation of bicarbonate transporter SbtA. Proceedings of the National Academy of Sciences of the United States of America 120 (8), e2205882120 (2023)
71.
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Selim, K.; Zimmer, E.: SbtB: der fehlende Sensor für anorganischen Kohlenstoff in Cyanobakterien. Biospektrum 29 (2), pp. 140 - 143 (2023)
72.
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Bakker, R.; Ellers, J.; Roelofs, D.; Vooijs, R.; Dijkstra, T.; van Gestel, C.; Hoedjes, K.: Combining time-resolved transcriptomics and proteomics data for Adverse Outcome Pathway refinement in ecotoxicology. Science of the Total Environment 869, 161740 (2023)
73.
Journal Article
Heim, C.; Spring, A.-K.; Kirchgäßner, S.; Schwarzer, D.; Hartmann, M.: Cereblon neo-substrate binding mimics the recognition of the cyclic imide degron. Biochemical and Biophysical Research Communications 646, pp. 30 - 35 (2023)
74.
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Martinez-Goikoetxea, M.; Lupas, A.: A conserved motif suggests a common origin for a group of proteins involved in the cell division of Gram-positive bacteria. PLoS One 18 (1), e0273136 (2023)
75.
Journal Article
Yoshimoto, S.; Aoki, S.; Ohara, Y.; Ishikawa, M.; Suzuki, A.; Linke, D.; Lupas, A.; Hori, K.: Identification of the adhesive domain of AtaA from Acinetobacter sp. Tol 5 and its application in immobilizing Escherichia coli. Frontiers in Bioengineering and Biotechnology 10, e1095057 (2023)
76.
Journal Article
Coban, A.; Bornberg-Bauer, E.; Kemena, C.: Domain Evolution of Vertebrate Blood Coagulation Cascade Proteins. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution 90 (6), pp. 418 - 428 (2022)
77.
Journal Article
Heim, C.; Spring, A.-K.; Kirchgäßner, S.; Schwarzer, D.; Hartmann, M.: Identification and structural basis of C-terminal cyclic imides as natural degrons for cereblon. Biochemical and Biophysical Research Communications 637, pp. 66 - 72 (2022)
78.
Journal Article
Krasavin, M.; Adamchik, M.; Bubyrev, A.; Heim, C.; Maiwald, S.; Zhukovsky, D.; Zhmurov, P.; Bunev, A.; Hartmann, M.: Synthesis of novel glutarimide ligands for the E3 ligase substrate receptor Cereblon (CRBN): Investigation of their binding mode and antiproliferative effects against myeloma cell lines. European Journal of Medicinal Chemistry 246, 114990 (2022)
79.
Journal Article
Krasavin, M.; Bubyrev, A.; Kazantsev, A.; Heim, C.; Maiwald, S.; Zhukovsky, D.; Dar'in, D.; Hartmann, M.; Brunev, A.: Replacing the phthalimide core in thalidomide with benzotriazole. Journal of Enzyme Inhibition and Medicinal Chemistry 37 (1), pp. 527 - 530 (2022)
80.
Journal Article
Stahlecker, J.; Klett, T.; Schwer, M.; Jaag, S.; Dammann, M.; Ernst, L.; Braun, M.; Zimmermann, M.; Kramer, M.; Lämmerhofer, M. et al.; Stehle, T.; Coles, M.; Boeckler, F.: Revisiting a challenging p53 binding site: a diversity-optimized HEFLib reveals diverse binding modes in T-p53C-Y220C. RSC Medicinal Chemistry 13 (12), pp. 1575 - 1586 (2022)
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