Sugiyama, M.; Azencott, C.-A.; Grimm, D.; Kawahara, Y.; Borgwardt, K.: Multi-Task Feature Selection on Multiple Networks via Maximum Flows. In: 2014 SIAM International Conference on Data Mining, S. 199 - 207 (Hg. Zaki, M.). 2014 SIAM International Conference on Data Mining , Philadelphia, PA, USA, 24. April 2014 - 26. April 2014. Society for Industrial and Applied Mathematics, Philadelphia, PA, USA (2014)

Azencott, C.-A.; Grimm, D.; Kawahara, Y.; Borgwardt, K.: A min-cut solution to mapping phenotypes to networks of genetic markers. In: 17th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2013). 17th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2013), Beijing, China, 07. April 2013 - 10. April 2013. (eingereicht)

Feragen, A.; Owen, M.; Petersen, J.; Wille, M.; Thomsen, L.; Dirksen, A.; de Bruijne, M.: Tree-Space Statistics and Approximations for Large-Scale Analysis of Anatomical Trees. In: Information Processing in Medical Imaging: 23rd International Conference, IPMI 2013, Asilomar, CA, USA, June 28-July 3, 2013, S. 74 - 85 (Hg. Gee, J.; Joshi, S.; Pohl, K.; Wells, W.; Zöllei, L.). 23rd International Conference on Information Processing in Medical Imaging (IPMI 2013), Asilomar, CA, USA, 28. Juni 2013 - 03. Juli 2013. Springer, Berlin, Germany (2013)

Feragen, A.; Petersen, J.; Grimm, D.; Dirksen, A.; Pedersen, J.; Borgwardt, K.; Bruijne, M.: Geometric tree kernels: Classification of COPD from airway tree geometry. In: Information Processing in Medical Imaging, S. 171 - 183 (Hg. Gee, J.; Joshi, S.). 23rd International Conference on Information Processing in Medical Imaging (IPMI 2013), Asilomar, CA, USA, 28. Juni 2013 - 03. Juli 2013. Springer, Berlin, Germany (2013)

Morris, Q.; Brenner, S.; Listgarten, J.; Stegle, O.: The future of genome-based medicine. In: Biocomputing 2013: Pacific Symposium on Biocomputing, S. 456 - 458 (Hg. Altman, R.; Dunker, A.; Hunter, L.; Murray, T.; Klein, T.). Pacific Symposium on Biocomputing (PSB 2013), Kohala Coast, HI, USA, 03. Januar 2013 - 07. Januar 2013. World Scientific Publishing Company, Singapore (2013)

Sugiyama, M.; Borgwardt, K.: Measuring Statistical Dependence via the Mutual Information Dimension. In: Twenty-Third International Joint Conference on Artificial Intelligence (IJCAI 2013 ), S. 1692 - 1698 (Hg. Rossi, F.). Twenty-Third International Joint Conference on Artificial Intelligence (IJCAI 2013 ), Beijing, China, 03. August 2013 - 09. August 2013. AAAI Press, Menlo Park, CA, USA (2013)

Engel, D.; Kottler, V.; Malisi, C.; Röttig, M.; Willing, E.; Schultheiss, S.: Crowd-Sourcing Design: Sketch Minimization using Crowds for Feedback. In: 4th Human Computation Workshop (HCOMP 2012), WS-12-08, S. 71 - 77. 4th Human Computation Workshop (HCOMP 2012), Toronto, ON, Canada, 23. Juli 2012. (2012)

Stegle, O.; Lippert, C.; Mooij, J.; Lawrence, N.; Borgwardt, K.: Efficient inference in matrix-variate Gaussian models with iid observation noise. In: Advances in Neural Information Processing Systems 24, S. 630 - 638 (Hg. Shawe-Taylor, J.; Zemel, R.; Bartlett, P.; Pereira, F.; Weinberger, K.). Twenty-Fifth Annual Conference on Neural Information Processing Systems (NIPS 2011), Granada, Spain, 12. Dezember 2011 - 17. Dezember 2011. Curran, Red Hook, NY, USA (2012)

Stegle, O.; Roth, F.; Morris, Q.; Listgarten, J.: Personalized medicine: from genotypes and molecular phenotypes towards computed therapy. In: Biocomputing 2012: Proceedings of the Pacific Symposium, S. 323 - 326 (Hg. Altman, R.; Dunker, A.; Hunter, L.; Murray, T.; Klein, T.). Pacific Symposium on Biocomputing (PSB 2012), Kohala Coast, HI, USA, 03. Januar 2012 - 07. Januar 2012. World Scientific Publishing, Singapore (2012)

Achlioptas, P.; Schölkopf, B.; Borgwardt, K.: Two-locus association mapping in subquadratic time. In: 17th ACM SIGKKD Conference on Knowledge Discovery and Data Mining (KDD 2011), S. 726 - 734 (Hg. Apté, C.; Ghosh, J.; Smyth, P.). 17th ACM SIGKKD Conference on Knowledge Discovery and Data Mining (KDD 2011), San Diego, CA, USA, 21. August 2011 - 24. August 2011. ACM Press, New York, NY, USA (2011)

Janzing, D.; Sgouritsa, E.; Stegle, O.; Peters, J.; Schölkopf, B.: Detecting low-complexity unobserved causes. In: 27th Conference on Uncertainty in Artificial Intelligence (UAI 2011), S. 383 - 391. 27th Conference on Uncertainty in Artificial Intelligence (UAI 2011), Barcelona, Spain, 14. Juli 2011 - 17. Juli 2011. (2011)

Kam-Thong, T.; Pütz, B.; Karbalai, N.; Müller−Myhsok, B.; Borgwardt, K.: Epistasis detection on quantitative phenotypes by exhaustive enumeration using GPUs. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria, 17. Juli 2011 - 19. Juli 2011. Bioinformatics 27 (13), S. i214 - i221 (2011)

Lei, L.; Rakitsch, B.; Borgwardt, K.: ccSVM: correcting Support Vector Machines for confounding factors in biological data classification. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria, 17. Juli 2011 - 19. Juli 2011. Bioinformatics 27 (13), S. i342 - i348 (2011)

Shervashidze, N.; Borgwardt, K.: Fast subtree kernels on graphs. In: Advances in Neural Information Processing Systems 22, S. 1660 - 1668 (Hg. Bengio, Y.; Schuurmans, D.; Lafferty, J.; Williams, C.; Culotta, A.). 23rd Annual Conference on Neural Information Processing Systems (NIPS 2009), Vancouver, BC, Canada, 07. Dezember 2009 - 10. Dezember 2009. Curran, Red Hook, NY, USA (2010)

Rattray, M.; Stegle, O.; Sharp, K.; Winn, J.: Inference algorithms and learning theory for Bayesian sparse factor analysis. International Workshop on Statistical-Mechanical Informatics 2009 (IW-SMI 2009), Kyoto, Japan, 13. September 2009 - 16. September 2009. Journal of Physics: Conference Series 197 (1), 012002, (2009)

Stegle, O.; Denby, K.; Wild, D.; McHattie, S.; Mead, A.; Ghahramani, Z.; Borgwardt, K.: Discovering Temporal Patterns of Differential Gene Expression in Microarray Time Series. In: German Conference on Bioinformatics: GCB 2009, S. 133 - 142 (Hg. Grosse, I.; Neumann, S.; Posch, S.; Schreiber, F.; Stadler, P.). German Conference on Bioinformatics 2009 (GCB 2009), Halle, Germany, 28. September 2009 - 30. September 2009. Gesellschaft für Informatik, Bonn, Germany (2009)

Lippert, C.; Shervashidze, N.; Stegle, O.: Relational models for generating labeled real-world graphs. In: 7th International Workshop on Mining and Learning with Graphs (MLG 2009). 7th International Workshop on Mining and Learning with Graphs (MLG 2009), Leuven, Belgium, 02. Juli 2009 - 04. Juli 2009. (2009)

Kondor, R.; Shervashidze, N.; Borgwardt, K.: The graphlet spectrum. In: ICML '09: Proceedings of the 26th Annual International Conference on Machine Learning, S. 529 - 536 (Hg. Danyluk, A.; Bottou, L.; Littman, M.). 26th International Conference on Machine Learning (ICML 2009), Montreal, Canada, 14. Juni 2009 - 18. Juni 2009. ACM Press, New York, NY, USA (2009)

Schweikert, G.; Widmer, C.; Schölkopf, B.; Rätsch, G.: An Empirical Analysis of Domain Adaptation Algorithms for Genomic Sequence Analysis. In: Advances in neural information processing systems 21, M14, S. 1433 - 1440 (Hg. Koller, D.; Schuurmans, D.; Bengio, Y.; Bottou, L.). Twenty-Second Annual Conference on Neural Information Processing Systems (NIPS 2008), Vancouver, BC, Canada, 08. Dezember 2008 - 10. Dezember 2008. Curran, Red Hook, NY, USA (2009)

Stegle, O.; Denby, K.; Wild, D.; Ghahramani, Z.; Borgwardt, K.: A robust Bayesian two-sample test for detecting intervals of differential gene expression in microarray time series. In: Research in Computational Molecular Biology: 13th Annual International Conference, RECOMB 2009, Tucson, AZ, USA, May 18-21, 2009, S. 201 - 216 (Hg. Batzoglou, S.). 13th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2009), Tucson, AZ, USA, 18. Mai 2009 - 21. Mai 2009. Springer, Berlin, Germany (2009)