Publikationen von AN Lupas

Zeitschriftenartikel (138)

1.
Zeitschriftenartikel
Martinez-Goikoetxea, M.; Lupas, A.: New protein families with hendecad coiled coils in the proteome of life. Journal of Structural Biology 215 (3), 108007 (2023)
2.
Zeitschriftenartikel
Maksymenko, K.; Maurer, A.; Aghaallaei, N.; Barry, C.; Borbarán-Bravo, N.; Ullrich, T.; Dijkstra, T.; Hernandez-Alvarez, B.; Müller, P.; Lupas, A. et al.; Skokowa, J.; ElGamacy, M.: The design of functional proteins using tensorized energy calculations. Cell Reports Methods 3 (8), 100560 (2023)
3.
Zeitschriftenartikel
Martinez-Goikoetxea, M.; Lupas, A.: A conserved motif suggests a common origin for a group of proteins involved in the cell division of Gram-positive bacteria. PLoS One 18 (1), e0273136 (2023)
4.
Zeitschriftenartikel
Yoshimoto, S.; Aoki, S.; Ohara, Y.; Ishikawa, M.; Suzuki, A.; Linke, D.; Lupas, A.; Hori, K.: Identification of the adhesive domain of AtaA from Acinetobacter sp. Tol 5 and its application in immobilizing Escherichia coli. Frontiers in Bioengineering and Biotechnology 10, e1095057 (2023)
5.
Zeitschriftenartikel
Pereira, J.; Lupas, A.: New β-Propellers Are Continuously Amplified From Single Blades in all Major Lineages of the β-Propeller Superfamily. Frontiers in Molecular Biosciences 9, 895496 (2022)
6.
Zeitschriftenartikel
Skokowa, J.; Hernandez Alvarez, B.; Coles, M.; Ritter, M.; Nasri, M.; Haaf, J.; Aghaallaei, N.; Xu, Y.; Mir, P.; Krahl, A.-C. et al.; Rogers, K.; Maksymenko, K.; Bajoghli, B.; Welte, K.; Lupas, A.; Müller, P.; ElGamacy, M.: A topological refactoring design strategy yields highly stable granulopoietic proteins. Nature Communications 13 (1), 2948 (2022)
7.
Zeitschriftenartikel
Elhabashy, H.; Merino, F.; Alva, V.; Kohlbacher, O.; Lupas, A.: Exploring protein-protein interactions at the proteome level. Structure 30 (4), S. 462 - 475 (2022)
8.
Zeitschriftenartikel
Ramos, A.; Aquino, M.; García, G.; Gaspar, M.; de la Cruz, C.; Saavedra-Flores, A.; Brom, S.; Cervantes-Rivera, R.; Galindo-Sánchez, C.; Hernandez, R. et al.; Puhar, A.; Lupas, A.; Sepulveda, E.: RpuS/R Is a Novel Two-Component Signal Transduction System That Regulates the Expression of the Pyruvate Symporter MctP in Sinorhizobium fredii NGR234. Frontiers in Microbiology 13, 871077 (2022)
9.
Zeitschriftenartikel
Alexander, L.; Lepore, R.; Kryshtafovych, A.; Adamopoulos, A.; Alahuhta, M.; Arvin, A.; Bomble, Y.; Böttcher, B.; Breyton, C.; Chiarini, A. et al.; Chinnam, N.; Chiu, W.; Fidelis, K.; Grinter, R.; Gupta, G.; Hartmann, M.; Hayes, C.; Heidebrecht, T.; Ilari, A.; Joachimiak, A.; Kim, Y.; Linares, R.; Lovering, A.; Lunin, V.; Lupas, A.; Makbul, C.; Michalska, K.; Moult, J.; Mukherjee, P.; Nutt, W.; Oliver, S.; Perrakis, A.; Stols, L.; Tainer, J.; Topf, M.; Tsutakawa, S.; Valdivia-Delgado, M.; Schwede, T.: Target highlights in CASP14: Analysis of models by structure providers. Proteins: Structure, Function, and Genetics 89 (12), S. 1647 - 1672 (2021)
10.
Zeitschriftenartikel
Kryshtafovych, A.; Moult, J.; Albrecht, R.; Chang, G.; Cao, K.; Fraser, A.; Greenfield, J.; Hartmann, M.; Herzberg, O.; Joosts, I. et al.; Leiman, P.; Linden, S.; Lupas, A.; Nelson, D.; Rees, S.; Shang, X.; Sokolova, M.; Tidow, H.: Computational models in the service of X-ray and cryo-electron microscopy structure determination. Proteins: Structure, Function, and Bioinformatics 89 (12), S. 1633 - 1646 (2021)
11.
Zeitschriftenartikel
Millán, C.; Keegan, R.; Pereira, J.; Sammito, M.; Simpkin, A.; McCoy, A.; Lupas, A.; Hartmann, M.; Rigden, D.; Read, R.: Assessing the utility of CASP14 models for molecular replacement. Proteins: Structure, Function, and Bioinformatics 89 (12), S. 1752 - 1769 (2021)
12.
Zeitschriftenartikel
Pereira, J.; Simpkin, A.; Hartmann, M.; Rigden, D.; Keegan, R.; Lupas, A.: High-accuracy protein structure prediction in CASP14. Proteins: Structure, Function, and Bioinformatics 89 (12), S. 1687 - 1699 (2021)
13.
Zeitschriftenartikel
Masrati, G.; Landau, M.; Ben-Tal, R.; Lupas, A.; Kosloff, M.; Kosinski, J.: Integrative Structural Biology in the Era of Accurate Structure Prediction. Journal of Molecular Biology (London) 433 (20), 167127 (2021)
14.
Zeitschriftenartikel
Solan, R.; Pereira, J.; Lupas, A.; Kolodny, R.; Ben-Tal, N.: Gram-negative outer-membrane proteins with multiple β-barrel domains. Proceedings of the National Academy of Sciences of the United States of America 118 (31), e2104059118 (2021)
15.
Zeitschriftenartikel
Fuchs, A.; Alva, V.; Lupas, A.: An astonishing wealth of new proteasome homologs. Bioinformatics 37 (24), S. 4694 - 4703 (2021)
16.
Zeitschriftenartikel
Ben-Tal, N.; Lupas, A.: Editorial overview: Sequences and topology: "paths from sequence to structure". Current Opinion in Structural Biology 68, S. VI - VIII (2021)
17.
Zeitschriftenartikel
Lupas, A.; Pereira, J.; Alva, V.; Merino, F.; Coles, M.; Hartmann, M.: The breakthrough in protein structure prediction. Biochemical Journal 478 (10), S. 1885 - 1890 (2021)
18.
Zeitschriftenartikel
Fuchs, A.; Ammelburg, M.; Martin, J.; Schmitz, R.; Hartmann, M.; Lupas, A.: Archaeal Connectase is a specific and efficient protein ligase related to proteasome β subunits. Proceedings of the National Academy of Sciences of the United States of America 118 (11), e2017871118 (2021)
19.
Zeitschriftenartikel
Pereira, J.; Lupas, A.: The VCBS superfamily forms a third supercluster of β-propellers that includes tachylectin and integrins. Bioinformatics 36 (24), S. 5618 - 5622 (2021)
20.
Zeitschriftenartikel
Gabler, F.; Nam, S.-Z.; Till, S.; Mirdita, M.; Steinegger, M.; Söding, J.; Lupas, A.; Alva, V.: Protein sequence analysis using the MPI Bioinformatics Toolkit. Current Protocols in Bioinformatics 72 (1), e108 (2020)
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