Journal Article (605)

21.
Journal Article
Wlodzimierz, P.; Rabanal, F.; Burns, R.; Naish, M.; Primetis, E.; Scott, A.; Mandáková, T.; Gorringe, N.; Tock, A.; Holland, D. et al.; Fritschi, K.; Habring, A.; Lanz, C.; Patel, C.; Schlegel, T.; Collenberg, M.; Mielke, M.; Nordborg, M.; Roux, F.; Shirsekar, G.; Alonso-Blanco, C.; Lysak, M.; Novikova, P.; Bousios, A.; Weigel, D.; Henderson, I.: Cycles of satellite and transposon evolution in Arabidopsis centromeres. Nature 618 (7965), pp. 557 - 565 (2023)
22.
Journal Article
Bazin, J.; Elvira-Matelot, E.; Blein, T.; Jauvion, V.; Bouteiller, N.; Cao, J.; Crespi, M.; Vaucheret, H.: Synergistic action of the Arabidopsis spliceosome components PRP39a and SmD1b in promoting post-transcriptional transgene silencing. Plant Cell 35 (6), koad091, pp. 1917 - 1935 (2023)
23.
Journal Article
Hirt, H.; Al-Babili, S.; Almeida-Trapp, M.; Antoine, M.; Aranda, M.; Bartels, D.; Bennett, M.; Blilou, I.; Boer, D.; Boulouis, A. et al.; Bowler, C.; Brunel-Muguet, S.; Chardon, F.; Colcombet, J.; Colot, V.; Daszkowska-Golec, A.; Dinneny, J.; Field, B.; Froehlich, K.; Gardener, C.; Gojon, A.; Gomès, E.; Gómez Álvarez, E.; Guttierez, C.; Havaux, M.; Hayes, S.; Heard, E.; Hodges, M.; Alghamdi, A.; Laplaze, L.; Lauersen, K.; Leonhard, N.; Johnson, X.; Jones, J.; Kollist, H.; Kopriva, S.; Krapp, A.; Lopez-Portillo Masson, M.; McCabe, F.; Merendino, L.; Molina, A.; Moreno Ramirez, J.; Müller-Röber, B.; Nicolas, M.; Nir, I.; Olivas Orduna, I.; Pardo-Tomás , J.; Reichheld, J.-P.; Rodriguez Egea, P.; Rouached, H.; Saad, M.; Schlögelhofer, P.; Singh, K.; De Smet, I.; Stanschewski, C.; Tester, M.; Walshe, C.; Weber, A.; Weigel, D.; Wigge, P.; Wrzaczek, M.; Wulff, B.; Young, I.: PlantACT!: How to tackle the climate crisis. Trends in Plant Science 28 (5), pp. 537 - 543 (2023)
24.
Journal Article
Wu, Y.; Li, D.; Hu, Y.; Li, H.; Ramstein, G.; Zhou, S.; Zhang, X.; Bao, Z.; Zhang, Y.; Song, B. et al.; Zhou, Y.; Zhou, Y.; Gagnon, E.; Särkinen, T.; Knapp, S.; Zhang, C.; Städler, T.; Buckler, E.; Huang, S.: Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell 186 (11), pp. 2313 - 2328 (2023)
25.
Journal Article
Kersten, S.; Chang, J.; Huber, C.; Voichek, Y.; Lanz, C.; Hagmaier, T.; Lang, P.; Lutz, U.; Hirschberg, I.; Lerchl, J. et al.; Porri, A.; Van de Peer, Y.; Schmid, K.; Weigel, D.; Rabanal, F.: Standing genetic variation fuels rapid evolution of herbicide resistance in blackgrass. Proceedings of the National Academy of Sciences of the United States of America 120 (16), e2206808120 (2023)
26.
Journal Article
Vallebueno-Estrada, M.; Hernández-Robles, G.; González-Orozco, E.; López-Valdivia, I.; Rosales Tham, R.; Vásquez Sánchez, V.; Swarts, K.; Dillehay, T.; Vielle-Calzada, J.; Montiel, R.: Domestication and lowland adaptation of coastal preceramic maize from Paredones, Peru. eLife 12, e83149 (2023)
27.
Journal Article
Barrera-Redondo, J.; Lotharukpong, J.; Drost, H.-G.; Coelho, S.: Uncovering gene-family founder events during major evolutionary transitions in animals, plants and fungi using GenEra. Genome Biology 24 (1), 54 (2023)
28.
Journal Article
Ferguson, S.; Jones, A.; Murray, K.; Schwessinger, B.; Borevitz, J.: Interspecies genome divergence is predominantly due to frequent small scale rearrangements in Eucalyptus. Molecular Ecology 32 (6), pp. 1271 - 1287 (2023)
29.
Journal Article
Jaegle, B.; Pisupati, H.; Soto-Jiménez, L.; Burns, R.; Rabanal, F.; Nordborg, M.: Extensive sequence duplication in Arabidopsis revealed by pseudo-heterozygosity. Genome Biology 24 (1), 44 (2023)
30.
Journal Article
Mateos, J.; Sanchez, S.; Legris, M.; Esteve-Bruna, D.; Torchio, J.; Petrillo, E.; Goretti, D.; Blanco-Touriñán, N.; Seymour, D.; Schmid, M. et al.; Weigel, D.; Alabadí, D.; Yanofsky, M.: PICLN modulates alternative splicing and light/temperature responses in plants. Plant Physiology 191 (2), kiac527, pp. 1036 - 1051 (2023)
31.
Journal Article
Zozaya, S.; Teasdale, L.; Tedeschi, L.; Higgie, M.; Hoskin, C.; Moritz, C.: Initiation of speciation across multiple dimensions in a rock-restricted, tropical lizard. Molecular Ecology 32 (3), pp. 680 - 695 (2023)
32.
Journal Article
Arce, A.; Mencia, R.; Cambiagno, D.; Lang, P.; Liu, C.; Burbano, H.; Weigel, D.; Manavella, P.: Polymorphic Inverted Repeats near coding genes impact chromatin topology and phenotypic traits in Arabidopsis thaliana. Cell Reports 42 (1), 112029 (2023)
33.
Journal Article
Kreiner, J.; Latorre, S.; Burbano, H.; Stinchcombe, J.; Otto, S.; Weigel, D.; Wright, S.: Rapid weed adaptation and range expansion in response to agriculture over the past two centuries. Science 378 (6624), pp. 1079 - 1085 (2022)
34.
Journal Article
Lundberg, D.; de Pedro Jové, R.; Na Ayutthaya, P.; Karasov, T.; Shalev, O.; Poersch, K.; Ding, W.; Bollmann-Giolai, A.; Bezrukov, I.; Weigel, D.: Contrasting patterns of microbial dominance in the Arabidopsis thaliana phyllosphere. Proceedings of the National Academy of Sciences of the United States of America 119 (52), e2211881119 (2022)
35.
Journal Article
Schulze, S.; Yu, L.; Hua, C.; Zhang, L.; Kolb, D.; Weber, H.; Ehinger, A.; Saile, S.; Stahl, M.; Franz-Wachtel, M. et al.; Lei, L.; El Kasmi, F.; Nürnberger, T.; Cevik, V.; Kemmerling, B.: The Arabidopsis TIR-NBS-LRR protein CSA1 guards BAK1-BIR3 homeostasis and mediates convergence of pattern- and effector-induced immune responses. Cell Host & Microbe 30 (12), pp. 1717 - 1731 (2022)
36.
Journal Article
Srikant, T.; Yuan, W.; Berendzen, K.; Contreras Garrido, A.; Drost, H.-G.; Schwab, R.; Weigel, D.: Canalization of genome-wide transcriptional activity in Arabidopsis thaliana accessions by MET1-dependent CG methylation. Genome Biology 23 (1), 263 (2022)
37.
Journal Article
Rabanal, F.; Gräff, M.; Lanz, C.; Fritschi, K.; Llaca, V.; Lang, M.; Carbonell-Bejerano, P.; Henderson, I.; Weigel, D.: Pushing the limits of HiFi assemblies reveals centromere diversity between two Arabidopsis thaliana genomes. Nucleic Acids Research (London) 50 (21), gkac1115, pp. 12309 - 12327 (2022)
38.
Journal Article
Wibowo, A.; Antunez-Sanchez, J.; Dawson, A.; Price, J.; Meehan, C.; Wrightsman, T.; Collenberg, M.; Bezrukov, I.; Becker, C.; Benhamed, M. et al.; Weigel, D.; Gutierrez-Marcos, J.: Predictable and stable epimutations induced during clonal plant propagation with embryonic transcription factor. PLoS Genetics 18 (11), e1010479 (2022)
39.
Journal Article
Röseler, W.; Collenberg, M.; Yoshida, K.; Lanz, C.; Sommer, R.; Rödelsperger, C.: The improved genome of the nematode Parapristionchus giblindavisi provides insights into lineage-specific gene family evolution. G3: Genes, Genomes, Genetics 12 (10), jkac215 (2022)
40.
Journal Article
Yoshihara, T.; Miller, N.; Rabanal, F.; Myles, H.; Kwak, I.-Y.; Broman, K.; Sadkhin, B.; Baxter, I.; Dilkes, B.; Hudson, M. et al.; Spalding, E.: Leveraging orthology within maize and Arabidopsis QTL to identify genes affecting natural variation in gravitropism. Proceedings of the National Academy of Sciences of the United States of America 119 (40), e2212199119 (2022)
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