Carbonell-Bejerano, P.; Royo, C.; Ferradás, Y.; Rodríguez-Lorenzo, M.; Alañón, N.; Bezrukov, I.; Lanz, C.; Ibáñez, J.; Weigel, D.; Martínez-Zapater, J.: Identificación de variación clonal funcional en Tempranillo y Garnacha mediante el uso de ensamblajes de genomas de referencia varietales. In: Acta de Horticultura, Bd. 91, S. 12 - 15. IV Jornadas del Grupo de Viticultura de la SECH 2022, Pamplona, Spain, 26. Oktober 2022 - 28. Oktober 2022. Sociedad Española de Ciencias Hortícolas (2022)

Schwandner, A.; Ochßner, I.; Hausmann, L.; Kamal, N.; Pucker, B.; Holtgräwe, D.; Bemm, F.; Weigel, D.; Weisshaar, B.; Töpfer, R.: Determination of genetic loci in the control network of grapevine flowering. XII International Conference on Grapevine Breeding and Genetics, Bordeaux, France, 15. Juli 2018 - 20. Juli 2018. ISHS Acta Horticulturae 1248, O42, S. 331 - 336 (2018)

Feragen, A.; Petersen, J.; Grimm, D.; Dirksen, A.; Pedersen, J.; Borgwardt, K.; Bruijne, M.: Geometric tree kernels: Classification of COPD from airway tree geometry. In: Information Processing in Medical Imaging, S. 171 - 183 (Hg. Gee, J.; Joshi, S.). 23rd International Conference on Information Processing in Medical Imaging (IPMI 2013), Asilomar, CA, USA, 28. Juni 2013 - 03. Juli 2013. Springer, Berlin, Germany (2013)

Sugiyama, M.; Borgwardt, K.: Measuring Statistical Dependence via the Mutual Information Dimension. In: Twenty-Third International Joint Conference on Artificial Intelligence (IJCAI 2013 ), S. 1692 - 1698 (Hg. Rossi, F.). Twenty-Third International Joint Conference on Artificial Intelligence (IJCAI 2013 ), Beijing, China, 03. August 2013 - 09. August 2013. AAAI Press, Menlo Park, CA, USA (2013)

Engel, D.; Kottler, V.; Malisi, C.; Röttig, M.; Willing, E.; Schultheiss, S.: Crowd-Sourcing Design: Sketch Minimization using Crowds for Feedback. In: 4th Human Computation Workshop (HCOMP 2012), WS-12-08, S. 71 - 77. 4th Human Computation Workshop (HCOMP 2012), Toronto, ON, Canada, 23. Juli 2012. (2012)

Stegle, O.; Lippert, C.; Mooij, J.; Lawrence, N.; Borgwardt, K.: Efficient inference in matrix-variate Gaussian models with iid observation noise. In: Advances in Neural Information Processing Systems 24, S. 630 - 638 (Hg. Shawe-Taylor, J.; Zemel, R.; Bartlett, P.; Pereira, F.; Weinberger, K.). Twenty-Fifth Annual Conference on Neural Information Processing Systems (NIPS 2011), Granada, Spain, 12. Dezember 2011 - 17. Dezember 2011. Curran, Red Hook, NY, USA (2012)

Stegle, O.; Roth, F.; Morris, Q.; Listgarten, J.: Personalized medicine: from genotypes and molecular phenotypes towards computed therapy. In: Biocomputing 2012: Proceedings of the Pacific Symposium, S. 323 - 326 (Hg. Altman, R.; Dunker, A.; Hunter, L.; Murray, T.; Klein, T.). Pacific Symposium on Biocomputing (PSB 2012), Kohala Coast, HI, USA, 03. Januar 2012 - 07. Januar 2012. World Scientific Publishing, Singapore (2012)

Janzing, D.; Sgouritsa, E.; Stegle, O.; Peters, J.; Schölkopf, B.: Detecting low-complexity unobserved causes. In: 27th Conference on Uncertainty in Artificial Intelligence (UAI 2011), S. 383 - 391. 27th Conference on Uncertainty in Artificial Intelligence (UAI 2011), Barcelona, Spain, 14. Juli 2011 - 17. Juli 2011. (2011)

Kam-Thong, T.; Pütz, B.; Karbalai, N.; Müller−Myhsok, B.; Borgwardt, K.: Epistasis detection on quantitative phenotypes by exhaustive enumeration using GPUs. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria, 17. Juli 2011 - 19. Juli 2011. Bioinformatics 27 (13), S. i214 - i221 (2011)

Lei, L.; Rakitsch, B.; Borgwardt, K.: ccSVM: correcting Support Vector Machines for confounding factors in biological data classification. 19th Annual International Conference on Intelligent Systems for Molecular Biology and 10th European Conference on Computational Biology (ISMB/ECCB 2011), Wien, Austria, 17. Juli 2011 - 19. Juli 2011. Bioinformatics 27 (13), S. i342 - i348 (2011)

Rattray, M.; Stegle, O.; Sharp, K.; Winn, J.: Inference algorithms and learning theory for Bayesian sparse factor analysis. International Workshop on Statistical-Mechanical Informatics 2009 (IW-SMI 2009), Kyoto, Japan, 13. September 2009 - 16. September 2009. Journal of Physics: Conference Series 197 (1), 012002, (2009)

Stegle, O.; Denby, K.; Wild, D.; McHattie, S.; Mead, A.; Ghahramani, Z.; Borgwardt, K.: Discovering Temporal Patterns of Differential Gene Expression in Microarray Time Series. In: German Conference on Bioinformatics 2009 (GCB 2009), S. 133 - 142 (Hg. Grosse, I.; Neumann, S.; Posch, S.; Schreiber, F.; Stadler, P.). German Conference on Bioinformatics 2009 (GCB 2009), Halle, Germany, 28. September 2009 - 30. September 2009. Gesellschaft für Informatik, Bonn, Germany (2009)

Kondor, R.; Shervashidze, N.; Borgwardt, K.: The graphlet spectrum. In: ICML '09: Proceedings of the 26th Annual International Conference on Machine Learning, S. 529 - 536 (Hg. Danyluk, A.; Bottou, L.; Littman, M.). 26th International Conference on Machine Learning (ICML 2009), Montreal, Canada, 14. Juni 2009 - 18. Juni 2009. ACM Press, New York, NY, USA (2009)

Stegle, O.; Denby, K.; Wild, D.; Ghahramani, Z.; Borgwardt, K.: A robust Bayesian two-sample test for detecting intervals of differential gene expression in microarray time series. In: Research in Computational Molecular Biology: 13th Annual International Conference, RECOMB 2009, Tucson, AZ, USA, May 18-21, 2009, S. 201 - 216 (Hg. Batzoglou, S.). 13th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2009), Tucson, AZ, USA, 18. Mai 2009 - 21. Mai 2009. Springer, Berlin, Germany (2009)

Lippert, C.; Stegle, O.; Ghahramani, Z.; Borgwardt, K.: A kernel method for unsupervised structured network inference. In: Twelfth International Conference on Artificial Intelligence and Statistics (AIStats 2009), S. 368 - 375 (Hg. Van Dyk, D.; Welling, M.). Twelfth International Conference on Artificial Intelligence and Statistics (AIStats 2009), Clearwater Beach, FL, USA, 16. April 2009 - 18. April 2009. MIT Press, Cambridge, MA, USA (2009)

Zeller, G.; Henz, S.; Laubinger, S.; Weigel, D.; Rätsch, G.: Transcript normalization and segmentation of tiling array data. In: Pacific Symposium on Biocomputing (PSB 2008), S. 527 - 538. Pacific Symposium on Biocomputing (PSB 2008), Fairmont Orchid, HI, USA, 04. Januar 2008 - 08. Januar 2008. (2008)

Sonnenburg, S.; Schweikert, G.; Philips, P.; Behr, J.; Rätsch, G.: Accurate Splice site Prediction Using Support Vector Machines. NIPS 2006 Workshop on New Problems and Methods in Computational Biology, Whistler, Canada, 08. Dezember 2006. BMC Bioinformatics 8 (Supplement 10), S7, (2007)

Ou, S.; Bousios, A.; Bao, Z.: Comprehensive Annotation of Transposable Elements in the T2T TAIR12 Arabidopsis Genome. In Plant and Animal Genome 31 Conference (PAG 2024). Plant and Animal Genome 31 Conference (PAG 2024), San Diego, CA, USA, 13. Januar 2018 - 17. Januar 2018. (2024)

Ou, S.; Liao, H.; Lu, T.; Bao, Z.; Heringer, P.; Dainat, J.; Deng, C.; Rashid, U.: EDTA2: De Novo Transposon Annotation in Diverse TE Landscapes. In Plant and Animal Genome 31 Conference (PAG 2024). Plant and Animal Genome 31 Conference (PAG 2024), San Diego, CA, USA, 13. Januar 2018 - 17. Januar 2018. (2024)

Ashkenazy, H.; Shalev, O.; Karasov, T.; Neumann, M.; Weigel, D.: The evolution of Arabidopsis thaliana-associated Pseudomonas. In The Local Pangenome, 33, S. 81. The Local Pangenome, Alicante, Spain, 25. Oktober 2023 - 28. Oktober 2023. (2023)