Publikationen

Agnieszka Lipinska 

Zeitschriftenartikel (12)

1.
Zeitschriftenartikel
Denoeud, F.; Godfroy, O.; Cruaud, C.; Heesch, S.; Nehr, Z.; Tadrent, N.; Couloux, A.; Brillet-Guéguen, L.; Delage, L.; Mckeown, D. et al.; Motomura, T.; Sussfeld, D.; Fan, X.; Mazéas, L.; Terrapon, N.; Barrera-Redondo, J.; Petroll, R.; Reynes, L.; Choi, S.-W.; Jo, J.; Uthanumallian, K.; Bogaert, K.; Duc, C.; Ratchinski, P.; Lipinska, A.; Noel, B.; Murphy, E.; Lohr, M.; Khatei, A.; Hamon-Giraud, P.; Vieira, C.; Avia, K.; Akerfors, S.; Akita, S.; Badis, Y.; Barbeyron, T.; Belcour, A.; Berrabah, W.; Blanquart, S.; Bouguerba-Collin, A.; Bringloe, T.; Cattolico, R.; Cormier, A.; Cruz de Carvalho, H.; Dallet, R.; De Clerck, O.; Debit, A.; Denis, E.; Destombe, C.; Dinatale, E.; Dittami, S.; Drula, E.; Faugeron, S.; Got, J.; Graf, L.; Groisillier, A.; Guillemin, M.-L.; Harms, L.; Hatchett, W.; Henrissat, B.; Hoarau, G.; Jollivet, C.; Jueterbock, A.; Kayal, E.; Knoll, A.; Kogame, K.; Le Bars, A.; Leblanc, C.; Le Gall, L.; Ley, R.; Liu, X.; LoDuca, S.; Lopez, P.; Lopez, P.; Manirakiza, E.; Massau, K.; Mauger, S.; Mest, L.; Michel, G.; Monteiro, C.; Nagasato, C.; Nègre, D.; Pelletier, E.; Phillips, N.; Potin, P.; Rensing, S.; Rousselot, E.; Rousvoal, S.; Schroeder, D.; Scornet, D.; Siegel, A.; Tirichine, L.; Tonon, T.; Valentin, K.; Verbruggen, H.; Weinberger, F.; Wheeler, G.; Kawai, H.; Peters, A.; Yoon, H.; Hervé, C.; Ye, N.; Bapteste, E.; Valero, M.; Markov, G.; Corre, E.; Coelho, S.; Wincker, P.; Aury, J.-M.; Cock, J.: Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems. Cell 187 (24), S. 6943 - 6965 (2024)
2.
Zeitschriftenartikel
Mazéas, L.; Bouguerba-Collin, A.; Cock, J.; Denoeud, F.; Godfroy, O.; Brillet-Guéguen , L.; Barbeyron, T.; Lipinska, A.; Delage, L.; Corre, E. et al.; Drula, E.; Henrissat, B.; Czjzek, M.; Terrapon, N.; Hervé, C.: Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history. BMC Genomics 25 (1), 950 (2024)
3.
Zeitschriftenartikel
Luthringer, R.; Raphalen, M.; Guerra, C.; Colin, S.; Martinho, C.; Zheng, M.; Hoshino, M.; Badis, Y.; Lipinska, A.; Haas, F. et al.; Barrera-Redondo, J.; Alva, V.; Coelho, S.: Repeated co-option of HMG-box genes for sex determination in brown algae and animals. Science 283 (6689), eadk5466 (2024)
4.
Zeitschriftenartikel
Borg, M.; Krueger-Hadfield, S.; Destombe, C.; Collén, J.; Lipinska, A.; Coelho, S.: Red macroalgae in the genomic era. New Phytologist 240 (2), S. 471 - 488 (2023)
5.
Zeitschriftenartikel
Reifová, R.; Ament-Velásquez, S.; Bourgeois, Y.; Coughlan, J.; Kulmuni, J.; Lipinska, A.; Okude, G.; Stevison, L.; Yoshida, K.; Kitano, J.: Mechanisms of Intrinsic Postzygotic Isolation: From Traditional Genic and Chromosomal Views to Genomic and Epigenetic Perspectives. Cold Spring Harbor Perspectives in Biology 15 (10), a041607 (2023)
6.
Zeitschriftenartikel
Molinier, C.; Lenormand, T.; Haag, C.: No recombination suppression in asexually produced males of Daphnia pulex. Evolution: international journal of organic evolution 77 (9), qpad114, S. 1987 - 1999 (2023)
7.
Zeitschriftenartikel
Lipinska, A.; Krueger-Hadfield, S.; Godfroy, O.; Dittami, S.; Ayres-Ostrock, L.; Bonthond, E.; Brillet-Guéguen, L.; Coelho, S.; Corre, E.; Cossard, G. et al.; Destombe, C.; Epperlein, P.; Faugeron, S.; Ficko-Blean, E.; Beltrán, J.; Lavaut, E.; Le Bars, A.; Marchi, F.; Mauger, S.; Michel, G.; Potin, P.; Scornet, D.; Sotka, E.; Weinberger, F.; Cabral de Oliveira, M.; Guillemin, M.-L.; Plastino, E.; Valero, M.: The Rhodoexplorer platform for red algal genomics and whole genome assemblies for several Gracilaria species. Genome Biology and Evolution 17 (7), evad124 (2023)
8.
Zeitschriftenartikel
Krasovec, M.; Hoshino, M.; Zheng, M.; Lipinska, A.; Coelho, S.: Low spontaneous mutation rate in complex multicellular eukaryotes with a haploid-diploid life cycle. Molecular Biology and Evolution 40 (6), msad105 (2023)
9.
Zeitschriftenartikel
Hatchett, W.; Jueterbock, A.; Kopp, M.; Coyer, J.; Coelho, S.; Hoarau, G.; Lipinska, A.: Evolutionary dynamics of sex-biased gene expression in a young XY system: Insights from the brown alga genus Fucus. New Phytologist 238 (1), S. 422 - 437 (2023)
10.
Zeitschriftenartikel
Cossard, G.; Godfroy, O.; Nehr, Z.; Cruaud, C.; Cock, J.; Lipinska, A.; Coelho, S.: Selection drives the evolution of convergent gene expression changes during transitions to co-sexuality in haploid sexual systems. Nature Ecology & Evolution 6 (5), S. 579 - 589 (2022)
11.
Zeitschriftenartikel
Gueno, J.; Borg, M.; Bourdareau, S.; Cossard, G.; Godfroy, O.; Lipinska, A.; Tirichine, T.; Cock, J.; Coelho, S.: Chromatin landscape associated with sexual differentiation in a UV sex determination system. Nucleic Acids Research 50 (6), gkac145, S. 3307 - 3322 (2022)
12.
Zeitschriftenartikel
Müller, D.; Gaschet, E.; Godfroy, O.; Gueno, J.; Cossard, G.; Kunert, M.; Peters, A.; Westermeier, R.; Boland, W.; Cock, J. et al.; Lipinska, A.; Coelho, S.: A partially sex-reversed giant kelp sheds light into the mechanisms of sexual differentiation in a UV sexual system. New Phytologist 232 (1), S. 252 - 263 (2021)

Meeting Abstract (6)

13.
Meeting Abstract
Lipinska, A.; Cossard, G.; Epperlein, P.; Krueger, S.; Godfroy, O.; Ayres, L.; Mauger, S.; Scornet, D.; Marchi, F.; Lavaut, E. et al.; Destombe, C.; Plestino, E.; Oliveira, M.; Barrera-Redondo, J.; Guillemin, M.; Valero, M.; Coelho, S.: Scarlet tide: the first report of sex chromosomes in red algae. In European Journal of Phycology, 59 (Supplement 1), S. S101. 8th European Phycological Congress (EPC 2023): ”Scientific Opportunities for a Global Algal Revolution“, Brest, France, 20. August 2023 - 26. August 2023. Cambridge University Press, Cambridge [England] (2024)
14.
Meeting Abstract
Ratchinski, P.; Godfroy, O.; Lipinska, A.; Bogaert, K.; Scornet, D.; Dartevelle, L.; Peters, A.; Cruaud, S.; Cock, J.: Developmental and evolutionary surveys of gene expression during brown algal life cycles. In European Journal of Phycology, 59 (Supplement 1), S. S105. 8th European Phycological Congress (EPC 2023): ”Scientific Opportunities for a Global Algal Revolution“, Brest, France, 20. August 2023 - 26. August 2023. Cambridge University Press, Cambridge [England] (2024)
15.
Meeting Abstract
Brillet-Guéguen, L.; Wörtwein, T.; Le Bars, A.; Lipinska, A.; Krueger-Hadfield, S.; Godfroy, O.; Dittami, S.; Corre, E.: The Rhodoexplorer Genome Database: a Multi-Scale Genomic and Transcriptomic Data Resource for the Red Algae. In Les Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2023), S. 286. Les Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2023), 27. Juni 2023 - 30. Juni 2023. (2023)
16.
Meeting Abstract
Lipinska, A.; Barrera-Redondo, J.; Cossard, G.; Epperlein, P.; Godfroy, O.; Guillemin, M.-L.; Krueger-Hadfield, S.; Marchi, F.; Mauger, S.; Oliveira, M. et al.; Ostrock, L.; Plastino, E.; Scornet, D.; Valero, M.; Coelho, S.: Scarlet tide: the first report of sex chromosomes in red algae. In 56th Population Genetics Group Meeting (PopGroup 56), S. 3. 56th Population Genetics Group Meeting (PopGroup 56), London, UK, 04. Januar 2023 - 06. Januar 2023. (2023)
17.
Meeting Abstract
Molinier, C.; Haag, C.; Lenormand, T.: Asexuality is not faithfully transmitted by contagion in Daphnia pulex. In 56th Population Genetics Group Meeting (PopGroup 56), S. 18. 56th Population Genetics Group Meeting (PopGroup 56), London, UK, 04. Januar 2023 - 06. Januar 2023. (2023)
18.
Meeting Abstract
Lipinska, A.; Toda, N.; Godfroy, O.; Baudry, L.; Marbouty, M.; Koszul, R.; Heesch, S.; Nehr, Z.; Panaud, O.; Peters, A. et al.; Cock, J.; Coelho, S.: Sex chromosomes evolution: New insights from brown algae. In AlgaeEurope 2021, S. 128 - 129. AlgaeEurope 2021, 07. Dezember 2021 - 10. Oktober 2021. (2021)

Poster (8)

19.
Poster
Wörtwein, T.: A web-based toolkit for protein design. European RosettaCon 2024: Knowledge Transfer for Modern Protein Modeling and Design, Copenhagen, Denmark (2024)
20.
Poster
Brillet-Guéguen, L.; Wörtwein, T.; Le Bars, A.; Lipinska, A.; Krueger- Hadfield, S.; Godfroy, O.; Dittami, S.; Corre, E.: The Phaeoexplorer Genome Database: a Multi-Scale Genomic and Transcriptomic Data Resource for the Brown Algae. 8th European Phycological Congress (EPC 2023): ”Scientific Opportunities for a Global Algal Revolution“, Brest, France (2024)
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