Publikationen von V Alva

Alva, V.; Lupas, A.: Histones Predate the Split Between Bacteria and Archaea. Bioinformatics 35 (14), S. 2349 - 2353 (2019)

Ludwiczak, J.; Winski, A.; Marinho da Silva Neto, A.; Szczepaniak, K.; Alva, V.; Dunin-Horkawicz, S.: PiPred: a deep-learning method for prediction of π-helices in protein sequences. Scientific Reports 9, 6888 (2019)

Zimmermann, L.; Stephens, A.; Nam, S.-Z.; Rau, D.; Kübler, J.; Lozajic, M.; Gabler, F.; Söding, J.; Lupas, A.; Alva, V.: A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core. Journal of Molecular Biology 430 (15), S. 2237 - 2243 (2018)

Alvarez-Carreño, C.; Alva, V.; Becerra, A.; Lazcano, A.: Structure, function and evolution of the hemerythrin-like domain superfamily. Protein Science 27 (4), S. 848 - 860 (2018)

Sgromo, A.; Raisch, T.; Backhaus, C.; Keskeny, C.; Alva, V.; Weichenrieder, O.; Izaurralde, E.: Drosophila Bag-of-marbles directly interacts with the CAF40 subunit of the CCR4-NOT complex to elicit repression of mRNA targets. RNA-A Publication of the RNA Society 24 (3), S. 381 - 395 (2018)

Alva, V.; Lupas, A.: From ancestral peptides to designed proteins. Current Opinion in Structural Biology 48, S. 103 - 109 (2018)

Michalik, M.; Orwick-Rydmark, M.; Habeck, M.; Alva, V.; Arnold, T.; Linke, D.: An evolutionarily conserved glycine-tyrosine motif forms a folding core in outer membrane proteins. PLoS One 12 (8), e0182016 (2017)

Fuchs, A.; Alva, V.; Maldoner, L.; Albrecht, R.; Hartmann, M.; Martin, J.: The Architecture of the Anbu Complex Reflects an Evolutionary Intermediate at the Origin of the Proteasome System. Structure 25 (6), S. 834 - 845 (2017)

Lupas, A.; Alva, V.: Ribosomal proteins as documents of the transition from unstructured (poly)peptides to folded proteins. Journal of Structural Biology 198 (2), S. 74 - 81 (2017)

Alva, V.; Lupas, A.: The TULIP superfamily of eukaryotic lipid-binding proteins as a mediator of lipid sensing and transport. Biochimica et Biophysica Acta: BBA 1861 (8 Part B), S. 913 - 923 (2016)

Alva, V.; Nam, S.-Z.; Söding, J.; Lupas, A.: The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis. Nucleic Acids Research (London) 44 (W1), S. W410 - W415 (2016)

Alva, V.; Söding, J.; Lupas, A.: A vocabulary of ancient peptides at the origin of folded proteins. eLife 4, e09410 (2015)

Scharfenberg, F.; Serek-Heuberger, J.; Coles, M.; Hartmann, M.; Habeck, M.; Martin, J.; Lupas, A.; Alva, V.: Structure and evolution of N-domains in AAA metalloproteases. Journal of Molecular Biology 427 (4), S. 910 - 923 (2015)

Chellamuthu, V.; Alva, V.; Forchhammer, K.: From cyanobacteria to plants: conservation of PII functions during plastid evolution. Planta 237 (2), S. 451 - 462 (2013)

Bonitz, T.; Alva, V.; Saleh, O.; Lupas, A.; Heide, L.: Evolutionary relationships of microbial aromatic prenyltransferases. PLoS One 6 (11), e27336 (2011)

Kopec, K.; Alva, V.; Lupas, A.: Bioinformatics of the TULIP domain superfamily. Biochemical Society Transactions 39 (4), S. 1033 - 1038 (2011)

Kopec, K.; Alva, V.; Lupas, A.: Homology of SMP domains to the TULIP superfamily of lipid-binding proteins provides a structural basis for lipid exchange between ER and mitochondria. Bioinformatics 26 (16), S. 1927 - 1931 (2010)

Alva, V.; Remmert, M.; Biegert, A.; Lupas, A.; Söding, J.: A galaxy of folds. Protein Science 19 (1), S. 124 - 130 (2010)

Alva, V.; Dunin-Horkawicz, S.; Habeck, M.; Coles, M.; Lupas, A.: The GD box: a widespread noncontiguous supersecondary structural element. Protein Science 18 (9), S. 1961 - 1966 (2009)

Alva, V.; Dunin-Horkawicz, S.; Habeck, M.; Coles, M.; Lupas, A.: The GD box: A widespread non-contiguous supersecondary structural element. Protein Science 18 (9), S. 1961 - 1966 (2009)