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Schneeberger, K.; Hagmann, J.; Ossowski, S.; Warthmann, N.; Gesing, S.; Kohlbacher, O.; Weigel, D.: Simultaneous alignment of short reads against multiple genomes. Genome Biology 10 (9), R98 (2009)

Starz-Gaiano, M.; Melani, M.; Meinhardt, H.; Montell, D.: Interpretation of the UPD/JAK/STAT morphogen gradient in Drosophila follicle cells. Cell Cycle 8 (18), S. 2917 - 2925 (2009)

Wegewitz, V.; Schulenburg, H.; Streit, A.: Do males facilitate the spread of novel phenotypes within populations of the androdioecious nematode Caenorhabditis elegans? Journal of Nematology 41 (3), S. 247 - 254 (2009)

Boehm, B.; Rosinger, S.; Sauer, G.; Manfras, B.; Schiekofer, S.; Kalbacher, H.; Burster, T.: Protease-resistant human GAD-derived altered peptide ligands decrease TNF-α and IL-17 production in peripheral blood cells from patients with type 1 diabetes mellitus. Molecular Immunology 46 (13), S. 2576 - 2584 (2009)

Eulalio, A.; Tritschler, F.; Izaurralde, E.: The GW182 protein family in animal cells: new insights into domains required for miRNA-mediated gene silencing. RNA: A Publication of the RNA Society 15 (8), S. 1433 - 1442 (2009)

Fernández-Santiago, R.; Hoenig, S.; Lichtner, P.; Sperfeld, A.-D.; Sharma, M.; Berg, D.; Weichenrieder, O.; Illig, T.; Eger, K.; Meyer, T. et al.; Anneser, J.; Münch, C.; Zierz, S.; Gasser, T.; Ludolph, A.: Identification of novel Angiogenin (ANG) gene missense variants in German patients with amyotrophic lateral sclerosis. Journal of Neurology 256 (8), S. 1337 - 1342 (2009)

Mayer, W.; Herrmann, M.; Sommer, R.: Molecular phylogeny of beetle associated diplogastrid nematodes suggests host switching rather than nematode-beetle coevolution. BMC Evolutionary Biology 9, 212 (2009)

Schneeberger, K.; Ossowski, S.; Lanz, C.; Juul, T.; Petersen, A.; Nielsen, K.; Jørgensen, J.-E.; Weigel, D.; Andersen, S.: SHOREmap: simultaneous mapping and mutation identification by deep sequencing. Nature Methods 6 (8), S. 550 - 551 (2009)

Schultheiss, S.; Busch, W.; Lohmann, J.; Kohlbacher, O.; Rätsch, G.: KIRMES: kernel-based identification of regulatory modules in euchromatic sequences. Bioinformatics 25 (16), S. 2126 - 2133 (2009)

Wang, J.-W.; Czech, B.; Weigel, D.: miR156-regulated SPL transcription factors define an endogenous flowering pathway in Arabidopsis thaliana. Cell 138 (4), S. 738 - 749 (2009)

Wu, G.; Park, M.; Conway, S.; Wang, J.-W.; Weigel, D.; Poethig, R.: The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis. Cell 138 (4), S. 750 - 759 (2009)

Alva, V.; Dunin-Horkawicz, S.; Habeck, M.; Coles, M.; Lupas, A.: The GD box: A widespread non-contiguous supersecondary structural element. Protein Science 18 (9), S. 1961 - 1966 (2009)

Gröbner, S.; Linke, D.; Schütz, W.; Fladerer, C.; Madlung, J.; Autenrieth, I.; Witte, W.; Pfeifer, Y.: Emergence of carbapenem-non-susceptible extended-spectrum beta-lactamase-producing Klebsiella pneumoniae isolates at the university hospital of Tübingen, Germany. Journal of Medical Microbiology 58 (7), S. 912 - 922 (2009)

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Weigel, D.; Glazebrook, J.: Phenotypic analysis of Arabidopsis mutants: bacterial pathogens. Cold Spring Harbor protocols 4 (7), pdb.prot4983 (2009)