Contreras, A.: The epigenomic impact of transposable elements in natural populations. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2024)

Collenberg, M.: Arabidopsis thaliana genome assemblies and their use in hybrid transcriptome analyses. Dissertation, 195 pp., Eberhard-Karls-Universität, Tübingen, Germany (2023)

Duque Jaramillo, A.: Characterization of a Natural Arabidopsis thaliana: Pseudomonas viridiflava Pathosystem. Dissertation, 146 pp., Eberhard-Karls-Universität, Tübingen, Germany (2022)

Barragan, A.: From Natural Variation to Genetic Incompatibilities in Arabidopsis thaliana and Arabidopsis arenosa. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2020)

Barragan Lopez, A.: A DANGEROUS MIX: From Natural Variation to Genetic Incompatibilities in Arabidopsis thaliana and Arabidopsis arenosa. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2020)

Symeonidi, E.: Studying salicylic acid function in natural accessions of Arabidopsis thaliana using CRISPR/Cas technology. Dissertation, 133 pp., Eberhard-Karls-Universität, Tübingen, Germany (2019)

Regalado, J.: Use of Whole Genome Shotgun Sequencing for the Analysis of Microbial Communities in Arabidopsis thaliana Leaves. Dissertation, 123 pp., Eberhard-Karls-Universität, Tübingen, Germany (2019)

Van de Weyer, A.-L.: The pan-NLR'ome of Arabidopsis thaliana. Dissertation, 158 pp., Eberhard-Karls-Universität, Tübingen, Germany (2019)

Exposito-Alonso, M.: On climate change and genetic evolution in Arabidopsis thaliana. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2018)

Seymour, D.: On the genetics and genomics of Arabidopsis thaliana and its relatives. Dissertation, 302 pp., Eberhard-Karls-Universität, Tübingen, Germany (2018)

Lang, P.: Identification and characterization of new factors in the framework of Arabidopsis thaliana miRNA function. Dissertation, Eberhard-Karls-Universität, Tübingen, Germany (2017)

Rabbani, S.: An Algorithm to Build a Multi-Genome Reference and its Application. Dissertation, 90 pp., Eberhard-Karls-Universität, Tübingen, Germany (2017)

Lim, E.-C.: A large-scale computational framework for comparative analyses in population genetics and metagenomics. Dissertation, 108 pp., Eberhard-Karls-Universität, Tübingen, Germany (2016)

Lutz, U.: Temperature-dependent Flowering of Arabidopsis Thaliana is Modulated by Natural Variation of FLOWERING LOCUS M. Dissertation, Fakultät Wissenschaftszentrum Weihenstephan, Weihenstephan, Germany (2016)

Tran, D.: Biochemical Basis of Autoactivity of a Pair of Plant NLR Immune Receptors. Dissertation, 141 pp., Eberhard-Karls-Universität, Tübingen, Germany (2016)

Hagmann, J.: Characterizing short-term evolution of DNA methylation in A. thaliana using next-generation sequencing. Dissertation, 180 pp., Eberhard-Karls-Universität, Tübingen, Germany (2015)

Ponnu, J.: Modulation of Developmental Transitions by Trehalose-6-phosphate Signaling in Arabidopsis thaliana. Dissertation, 144 pp., Eberhard-Karls-Universität, Tübingen, Germany (2014)

Behr, C.: Harnessing Protein Language Models to improve classic Local Pairwise Alignments for more sensitive and scalable Deep Homology Detection. Master, Ebherhard-Karls-Universität, Tübingen, Germany (2022)

Schmid, M.; Lohmann, J.: Affymetrix Probe Synthesis Guidelines AtGenExpress. (2005), 9 pp.

Zaidi, M.; Harper, D.; Akhmanova, A.; Weigel, D.; Behrens, T.; Eisen, M.: eLife and Medicine: Rigorous review and editorial oversight of clinical preprints. eLife 10, e67528 (2021)