Publications
Molecular Biology

Journal Article (590)

1.
Journal Article
Duque-Jaramillo, A.; Ulmer, N.; Alseekh, S.; Bezrukov, I.; Fernie, A.; Skirycz, A.; Karasov, T.; Weigel, D.: The genetic and physiological basis of Arabidopsis thaliana tolerance to Pseudomonas viridiflava. New Phytologist 240 (5), pp. 1961 - 1975 (2023)
2.
Journal Article
Chen, J.; Li, L.; Kim, J.; Neuhäuser, B.; Wang, M.; Thelen, M.; Hilleary, R.; Chi, Y.; Wei, L.; Venkataramani, K. et al.; Exposito-Alonso, M.; Liu, C.; Keck, J.; Barragan, A.; Schwab, R.; Lutz, U.; Pei, Z.-M.; He, S.-Y.; Ludewig, U.; Weigel, D.; Zhu, W.: Small proteins modulate ion-channel-like ACD6 to regulate immunity in Arabidopsis thaliana. Molecular Cell Epub ahead (2023)
3.
Journal Article
Saarenpää, S.; Shalev, O.; Ashkenazy, H.; Carlos, V.; Lundberg, D.; Weigel, D.; Giacomello, S.: Spatial metatranscriptomics resolves host-bacteria-fungi interactomes. Nature Biotechnology Epub ahead (2023)
4.
Journal Article
Wang, M.-Y.; Chen, J.-B.; Wu, R.; Guo, H.-L.; Chen, Y.; Li, Z.-J.; Wei, L.-Y.; Liu, C.; He, S.-F.; Du, M.-D. et al.; Guo, Y.-L.; Peng, Y.-L.; Jones, J.; Weigel, D.; Huang, J.-H.; Zhu, W.-S.: The plant immune receptor SNC1 monitors helper NLRs targeted by a bacterial effector. Cell Host & Microbe 31 (11), pp. 1792 - 1803 (2023)
5.
Journal Article
Vanderschuren, H.; Chatukuta, P.; Weigel, D.; Mehta, D.: A new chance for genome editing in Europe. Nature Biotechnology 41 (10), pp. 1378 - 1380 (2023)
6.
Journal Article
Khaipho-Burch, M.; Cooper, M.; Crossa, J.; de Leon, N.; Holland, J.; Lewis, R.; McCouch, S.; Murray, S.; Rabbi, I.; Ronald, P. et al.; Ross-Ibarra, J.; Weigel, D.; Buckler, E.: Genetic modification can improve crop yields: but stop overselling it. Nature 621 (7979), pp. 470 - 473 (2023)
7.
Journal Article
Yuan, W.; Beitel, F.; Srikant, T.; Bezrukov, I.; Schäfer, S.; Kraft, R.; Weigel, D.: Pervasive Under-Dominance in Gene Expression Underlying Emergent Growth Trajectories in Arabidopsis thaliana Hybrids. Genome Biology: Biology for the Post-Genomic Era 24 (1), 200 (2023)
8.
Journal Article
Monroe, J.; Srikant, T.; Carbonell-Bejerano, P.; Becker, C.; Lensink, M.; Exposito-Alonso, M.; Klein, M.; Hildebrandt, J.; Neumann, M.; Kliebenstein, D. et al.; Weng, M.-L.; Imbert, E.; Ågren, J.; Rutter, M.; Fenster, C.; Weigel, D.: Author Correction: Mutation bias reflects natural selection in Arabidopsis thaliana. Nature 620 (7973), p. E13 (2023)
9.
Journal Article
Grigorjew, A.; Gynter, A.; Dias, F.; Buchfink, B.; Drost, H.-G.; Tomescu, A.: Sensitive inference of alignment-safe intervals from biodiverse protein sequence clusters using EMERALD. Genome Biology: Biology for the Post-Genomic Era 24 (1), 168 (2023)
10.
Journal Article
Monroe, J.; Murray, K.; Xian, W.; Srikant, T.; Carbonell-Bejerano, P.; Becker, C.; Lensink, M.; Exposito Alonso, M.; Klein, M.; Hildebrandt, J. et al.; Neumann, M.; Kliebenstein, D.; Weng, M.-E.; Imbert, L.; Ågren, J.; Rutter, M.; Fenster, C.; Weigel, D.: Reply to: Re-evaluating evidence for adaptive mutation rate variation. Nature 619 (7971), pp. E57 - E60 (2023)
11.
Journal Article
Gu, B.; Parkes, T.; Rabanal, F.; Smith, C.; Lu, F.-H.; McKenzie, N.; Dong, H.; Weigel, D.; Jones, J.; Cevik, V. et al.; Bevan, M.: The integrated LIM-peptidase domain of the CSA1-CHS3/DAR4 paired immune receptor detects changes in DA1 peptidase inhibitors in Arabidopsis. Cell Host & Microbe 31 (6), pp. 949 - 961 (2023)
12.
Journal Article
Kersten, S.; Rabanal, F.; Herrmann, J.; Hess, M.; Kronenberg, Z.; Schmid, K.; Weigel, D.: Deep haplotype analyses of target-site resistance locus ACCase in blackgrass enabled by pool-based amplicon sequencing. Plant Biotechnology Journal 21 (6), uqad008, pp. 1240 - 1253 (2023)
13.
Journal Article
Wlodzimierz, P.; Rabanal, F.; Burns, R.; Naish, M.; Primetis, E.; Scott, A.; Mandáková, T.; Gorringe, N.; Tock, A.; Holland, D. et al.; Fritschi, K.; Habring, A.; Lanz, C.; Patel, C.; Schlegel, T.; Collenberg, M.; Mielke, M.; Nordborg, M.; Roux, F.; Shirsekar, G.; Alonso-Blanco, C.; Lysak, M.; Novikova, P.; Bousios, A.; Weigel, D.; Henderson, I.: Cycles of satellite and transposon evolution in Arabidopsis centromeres. Nature 618 (7965), pp. 557 - 565 (2023)
14.
Journal Article
Bazin, J.; Elvira-Matelot, E.; Blein, T.; Jauvion, V.; Bouteiller, N.; Cao, J.; Crespi, M.; Vaucheret, H.: Synergistic action of the Arabidopsis spliceosome components PRP39a and SmD1b in promoting post-transcriptional transgene silencing. Plant Cell 35 (6), koad091, pp. 1917 - 1935 (2023)
15.
Journal Article
Hirt, H.; Al-Babili, S.; Almeida-Trapp, M.; Antoine, M.; Aranda, M.; Bartels, D.; Bennett, M.; Blilou, I.; Boer, D.; Boulouis, A. et al.; Bowler, C.; Brunel-Muguet, S.; Chardon, F.; Colcombet, J.; Colot, V.; Daszkowska-Golec, A.; Dinneny, J.; Field, B.; Froehlich, K.; Gardener, C.; Gojon, A.; Gomès, E.; Gómez Álvarez, E.; Guttierez, C.; Havaux, M.; Hayes, S.; Heard, E.; Hodges, M.; Alghamdi, A.; Laplaze, L.; Lauersen, K.; Leonhard, N.; Johnson, X.; Jones, J.; Kollist, H.; Kopriva, S.; Krapp, A.; Lopez-Portillo Masson, M.; McCabe, F.; Merendino, L.; Molina, A.; Moreno Ramirez, J.; Müller-Röber, B.; Nicolas, M.; Nir, I.; Olivas Orduna, I.; Pardo-Tomás , J.; Reichheld, J.-P.; Rodriguez Egea, P.; Rouached, H.; Saad, M.; Schlögelhofer, P.; Singh, K.; De Smet, I.; Stanschewski, C.; Tester, M.; Walshe, C.; Weber, A.; Weigel, D.; Wigge, P.; Wrzaczek, M.; Wulff, B.; Young, I.: PlantACT!: How to tackle the climate crisis. Trends in Plant Science 28 (5), pp. 537 - 543 (2023)
16.
Journal Article
Wu, Y.; Li, D.; Hu, Y.; Li, H.; Ramstein, G.; Zhou, S.; Zhang, X.; Bao, Z.; Zhang, Y.; Song, B. et al.; Zhou, Y.; Zhou, Y.; Gagnon, E.; Särkinen, T.; Knapp, S.; Zhang, C.; Städler, T.; Buckler, E.; Huang, S.: Phylogenomic discovery of deleterious mutations facilitates hybrid potato breeding. Cell 186 (11), pp. 2313 - 2328 (2023)
17.
Journal Article
Kersten, S.; Chang, J.; Huber, C.; Voichek, Y.; Lanz, C.; Hagmaier, T.; Lang, P.; Lutz, U.; Hirschberg, I.; Lerchl, J. et al.; Porri, A.; Van de Peer, Y.; Schmid, K.; Weigel, D.; Rabanal, F.: Standing genetic variation fuels rapid evolution of herbicide resistance in blackgrass. Proceedings of the National Academy of Sciences of the United States of America 120 (16), e2206808120 (2023)
18.
Journal Article
Vallebueno-Estrada, M.; Hernández-Robles, G.; González-Orozco, E.; López-Valdivia, I.; Rosales Tham, R.; Vásquez Sánchez, V.; Swarts, K.; Dillehay, T.; Vielle-Calzada, J.; Montiel, R.: Domestication and lowland adaptation of coastal preceramic maize from Paredones, Peru. eLife 12, e83149 (2023)
19.
Journal Article
Barrera-Redondo, J.; Lotharukpong, J.; Drost, H.-G.; Coelho, S.: Uncovering gene-family founder events during major evolutionary transitions in animals, plants and fungi using GenEra. Genome Biology 24 (1), 54 (2023)
20.
Journal Article
Ferguson, S.; Jones, A.; Murray, K.; Schwessinger, B.; Borevitz, J.: Interspecies genome divergence is predominantly due to frequent small scale rearrangements in Eucalyptus. Molecular Ecology 32 (6), pp. 1271 - 1287 (2023)
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