Publications of O Shalev

Saarenpää, S.; Shalev, O.; Ashkenazy, H.; Carlos, V.; Lundberg, D.; Weigel, D.; Giacomello, S.: Spatial metatranscriptomics resolves host-bacteria-fungi interactomes. Nature Biotechnology Epub ahead (2023)

Lundberg, D.; de Pedro Jové, R.; Na Ayutthaya, P.; Karasov, T.; Shalev, O.; Poersch, K.; Ding, W.; Bollmann-Giolai, A.; Bezrukov, I.; Weigel, D.: Contrasting patterns of microbial dominance in the Arabidopsis thaliana phyllosphere. Proceedings of the National Academy of Sciences of the United States of America 119 (52), e2211881119 (2022)

Shalev, O.; Ashkenazy, H.; Neumann, M.; Weigel, D.: Commensal Pseudomonas protect Arabidopsis thaliana from a coexisting pathogen via multiple lineage-dependent mechanisms. The ISME Journal 16 (5), pp. 1235 - 1244 (2022)

Shalev, O.; Karasov, T.; Lundberg, D.; Ashkenazy, H.; Ayutthaya, P.; Weigel, D.: Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant. Nature Ecology & Evolution 6 (4), pp. 383 - 396 (2022)

Ashkenazy, H.; Shalev, O.; Karasov, T.; Neumann, M.; Weigel, D.: The evolution of Arabidopsis thaliana-associated Pseudomonas. In The Local Pangenome, 33, p. 81. The Local Pangenome, Alicante, Spain, October 25, 2023 - October 28, 2023. (2023)

Saarenpää, S.; Shalev, O.; Ashkenazy, H.; de Oliveira-Carlos, V.; Lundberg, D.; Weigel, D.; Giacomello, S.: Spatially resolved host-bacteria-fungi interactomes via spatial metatranscriptomics. In Plant & Animal Genome Conference (PAG 30). Plant & Animal Genome Conference (PAG 30), San Diego, CA, USA, January 13, 2023 - January 18, 2023. (2023)

Saarenpää, S.; Shalev Skriptchak, O.; Ashkenazy, H.; Weigel, D.; Giacomello, S.: Unveiling spatial host-microbe interactions in Arabidopsis thaliana leaves by Spatial MetaTranscriptomics. In 31st International Conference on Arabidopsis Research (ICAR 2021), pp. 65 - 66. 31st International Conference on Arabidopsis Research (ICAR 2021), June 21, 2021 - June 25, 2021. (2021)

Lundberg, D.; de Pedro Jové, R.; Na Ayutthaya, P.; Karasov, T.; Shalev Skriptchak, O.; Poersch, K.; Weigel, D.: Contrasting colonization and host range of Sphingomonas and Pseudomonas in wild Arabidopsis thaliana and neighboring plants. In Molecular Plant-Microbe Interactions, 32 (10S), p. S1.234. XVIII Congress of the International Society for Molecular Plant-Microbe Interactions (IS-MPMI 2019), Glasgow, UK, July 14, 2019 - July 18, 2019. APS Press, St. Paul, MN, USA (2019)

Saarenpää, S.; Shalev, O.; Ashkenazy, H.; de Oliveira-Carlos, V.; Lundberg, D.; Weigel, D.; Giacomello, S.: Spatial Metatranscriptomics Resolves Host–Bacteria–Fungi Interactomes. Plant and Animal Genome 31 Conference (PAG 2024), San Diego, CA, USA (2024)

Saarenpää, S.; Shalev, O.; Ashkenazy, H.; de Oliveira-Carlos, V.; Lundberg, D.; Weigel, D.; Giacomello, S.: Spatially resolved host-bacteria-fungi interactomes via spatial metatranscriptomics. 3rd International Conference Controlling Microbes to Fight Infections (CMFI 2023), Tübingen, Germany (2023)

Shalev, O.; Gajrani, S.; Ratzke, C.: Turning the good against the bad: machine learning to maximize disease-suppressing microbial interactions by optimizing nutrient conditions. Cell Symposia: Infection Biology in the Age of the Microbiome, Paris, France (2023)

Saarenpää, S.; Shalev, O.; Ashkenazy, H.; Weigel, D.; Giacomello, S.: Harnessing Spatial Transcriptomics to Unveil Host-Microbe Interactions in Arabidopsis thaliana Leaves. Plant and Animal Genome XXIX Conference (PAG 2022), San Diego, CA, USA (2022)

Ashkenazy, H.; Karasov, T.; Shalev Skriptchak, O.; Neumann, M.; Weigel, D.: The evolution of Arabidopsis thaliana-associated Pseudomonas. XVIII Congress of the International Society for Molecular Plant-Microbe Interactions (IS-MPMI 2019), Glasgow, UK (2019)

Shalev Skriptchak, O.; Karasov, T.; Lundberg, D.; Ashkenazy, H.; Weigel, D.: Host Genotype-dependent Interactions among Pathogenic and Commensal Pseudomonas Strains in A. thaliana. XVIII Congress of the International Society for Molecular Plant-Microbe Interactions (IS-MPMI 2019), Glasgow, UK (2019)

Ashkenazy, H.; Karasov, T.; Shalev, O.; Neumann, M.; Weigel, D.: The evolution of Arabidopsis thaliana-associated Pseudomonas. Society for Molecular Biology and Evolution Conference 2019 (SMBE 2019), Manchester, UK (2019)

Shalev Skriptchak, O.; Karasov, T.; Lundberg, D.; Regalado, J.; Weigel, D.: Differential Fitness Effects Between Pseudomonas Synthetic Communities and Arabidopsis Thaliana Genotypes. 29th International Conference on Arabidopsis Research (ICAR 2018), Turku, Finland (2018)