Publications
_{Microbiome Science}

Huus, K.; Ley, R.: Gut bacterial metabolism produces neuroactive steroids in pregnant women. Life Metabolism 3 (6), loae030 (2024)

Noriega Tejada, J.; Walters, W.; Wang, Y.; Kordahi, M.; Chassaing, B.; Pickard, J.; Nunez, G.; Ley, R.; Gewirtz, A.: Prevention and cure of murine C. difficile infection by a Lachnospiraceae strain. Gut Microbes 16 (1), 2392872 (2024)

Chang, H.; Perkins, M.; Novaes, L.; Qian, F.; Zhang, T.; Neckel, P.; Ley, R.; Han, W.; De Araújo, I.: Stress-sensitive neural circuits change the gut microbiome via duodenal glands. Cell 187 (19), pp. 5393 - 5412 (2024)

Maier, L.; Stein-Thoeringer, C.; Ley, R.; Brötz-Oesterhelt, H.; Link, H.; Ziemert, N.; Wagner, S.; Peschel, A.: Integrating research on bacterial pathogens and commensals to fight infections-an ecological perspective. The Lancet Microbe 5 (8), 100843 (2024)

Salazar-Jaramillo, L.; de la Cuesta-Zuluaga, J.; Chica, L.; Cadavid , M.; Ley, R.; Reyes, A.; Escobar, J.: Gut microbiome diversity within Clostridia is negatively associated with human obesity. mSystems 9 (8), e0062724 (2024)

Enav, H.; Ley, R.: Tracking gene order provides a new perspective on intraspecific evolution in microbiotas. Nature Biotechnology Epub ahead (2024)

Mirretta Barone, C.; Heaver, S.; Gruber, L.; Zundel, F.; Vu, D.; Ley, R.: Spatially resolved lipidomics shows conditional transfer of lipids produced by Bacteroides thetaiotaomicron into the mouse gut. Cell Host & Microbe 32 (6), pp. 1025 - 1036 (2024)

García-Lozano, M.; Henzler, C.; González Porras, M.; Pons, I.; Berasategui, A.; Lanz, C.; Budde, H.; Oguchi, K.; Matsuura, Y.; Pauchet, Y. et al.; Goffredi, S.; Fukatsu, T.; Salem, H.: Paleocene origin of a streamlined digestive symbiosis in leaf beetles. Current Biology 34 (8), pp. 1621 - 1634 (2024)

Akbuğa-Schön, T.; Suzuki, T.; Jakob, D.; Vu, D.; Waters, J.; Ley, R.: The keystone gut species Christensenella minuta boosts gut microbial biomass and voluntary physical activity in mice. mBio 15 (2), e0283623 (2024)

Walters, W.; Ley, C.; Hastie, T.; Ley, R.; Parsonnet, J.: A modified Michaelis-Menten equation estimates growth from birth to 3 years in healthy babies in the USA. BMC Medical Research Methodology 24 (1), 27 (2024)

Daniel, N.; Wu, G.; Walters, W.; Compher , C.; Ni, J.; Delaroque, C.; Albenberg, L.; Ley, R.; Patterson, A.; Lewis, J. et al.; Gewirtz, A.; Chassaing, B.: Human intestinal microbiome determines individualized inflammatory response to dietary emulsifier carboxymethylcellulose consumption. Cellular and Molecular Gastroenterology and Hepatology 17 (2), pp. 315 - 318 (2024)

Enav, H.: Strain tracking in complex microbiomes using synteny analysis reveals per-species modes of evolution. In 2024 Microbes: Connecting Environment and Health, p. 13. 2024 Microbes: Connecting Environment and Health, Berlin, Germany, October 01, 2024 - October 02, 2024. (2024)

Chatterjee, M.: Novel genetic strategies for the targeted manipulation of human gut- associated microbes. In PhD Students’ Symposium 2024. PhD Students’ Symposium 2024, Tübingen, Germany, June 19, 2024 - June 20, 2024. (2024)

Kirk, C.: Designing a genetic system for Roseburia hominis. In PhD Students’ Symposium 2024. PhD Students’ Symposium 2024, Tübingen, Germany, June 19, 2024 - June 20, 2024. (2024)

Ley, R.: Oral and gut microbiota share an evolutionary history with humans. In 51st Naito Conference: Microbiome in Health and Disease, p. 26. 51st Naito Conference: Microbiome in Health and Disease, Sapporo, Japan, June 25, 2024 - June 28, 2024. (2024)

Liu, Y.: Find the glue in a dark room: Explore the adhesive proteins of a gut archaeon. In PhD Students’ Symposium 2024. PhD Students’ Symposium 2024, Tübingen, Germany, June 19, 2024 - June 20, 2024. (2024)

Mbong Ngwese, M.: Expanding the cultivated human archaeome via targeted isolation of Methanobrevibacter strains from previously unexplored human populations. In PhD Students’ Symposium 2024. PhD Students’ Symposium 2024, Tübingen, Germany, June 19, 2024 - June 20, 2024. (2024)

Huus, K.: Vaccine-induced fevers are associated with flagellar activity of the gut microbiome. In 75th Mosbacher Kolloquium "The Microbiome - from Understanding to Modulation". 75th Mosbacher Kolloquium "The Microbiome - from Understanding to Modulation", Mosbach, Germany, March 21, 2024 - March 23, 2024. (2024)

Maier, L.: Drug-microbiome interactions and their consequences on the host. In 75th Mosbacher Kolloquium "The Microbiome - from Understanding to Modulation". 75th Mosbacher Kolloquium "The Microbiome - from Understanding to Modulation", Mosbach, Germany, March 21, 2024 - March 23, 2024. (2024)

Enav, H.: Differentiating evolution via point mutation or structural change on a per-species basis in complex microbiomes. Institute for Medical Research Israel-Canada Department of Microbiology & Molecular Genetics, Jerusalem, Israel (2024)