Publications

Lotharukpong, J.; Zheng, M.; Luthringer, R.; Liesner, D.; Drost, H.-G.; Coelho, S.: A Transcriptomic Hourglass In Brown Algae. Nature 635 (8037), pp. 129 - 135 (2024)

Drost, H.-G.: How ancient genes form animal body plans. Nature Reviews Genetics 25 (7), p. 458 (2024)

Drost, H.-G.: Unveiling the expanding protein universe of life. Nature Reviews Genetics 25 (5), p. 306 (2024)

Contreras-Garrido, A.; Galanti, D.; Movilli, A.; Becker, C.; Bossdorf, O.; Drost, H.-G.; Weigel, D.: Transposon dynamics in the emerging oilseed crop Thlaspi arvense. PLOS Genetics 20 (1), e1011141 (2024)

Grigorjew, A.; Gynter, A.; Dias, F.; Buchfink, B.; Drost, H.-G.; Tomescu, A.: Sensitive inference of alignment-safe intervals from biodiverse protein sequence clusters using EMERALD. Genome Biology: Biology for the Post-Genomic Era 24 (1), 168 (2023)

Barrera-Redondo, J.; Lotharukpong, J.; Drost, H.-G.; Coelho, S.: Uncovering gene-family founder events during major evolutionary transitions in animals, plants and fungi using GenEra. Genome Biology 24 (1), 54 (2023)

Srikant, T.; Yuan, W.; Berendzen, K.; Contreras Garrido, A.; Drost, H.-G.; Schwab, R.; Weigel, D.: Canalization of genome-wide transcriptional activity in Arabidopsis thaliana accessions by MET1-dependent CG methylation. Genome Biology 23 (1), 263 (2022)

Edgar, R.; Taylor, J.; Lin, V.; Altman, T.; Barbera, P.; Meleshko, T.; Lohr, D.; Novakovsky, G.; Buchfink, B.; Al-Shayeb , B. et al.; Banfield, J.; de la Peña , M.; Korobeynikov, A.; Chikhi, R.; Babaian, A.: Petabase-scale sequence alignment catalyses viral discovery. Nature 602 (7895), pp. 142 - 147 (2022)

Cerruti, E.; Gisbert, C.; Drost, H.-G.; Valentino, D.; Valentino, D.; Portis, E.; Barchi, L.; Prohens, J.; Lanteri, S.; Comino, C. et al.; Catoni, M.: Grafting vigour is associated with DNA de-methylation in eggplant. Horticulture Research 8 (1), 241 (2021)

Moutsopoulos, I.; Maischak, L.; Lauzikaite, E.; Vasquez Urbina, S.; Williams, E.; Drost, H.-G.; Mohorianu, I.: noisyR: enhancing biological signal in sequencing datasets by characterizing random technical noise. Nucleic Acids Research 49 (14), e83 (2021)

Buchfink, B.; Reuter, K.; Drost, H.-G.: Sensitive protein alignments at tree-of-life scale using DIAMOND. Nature methods 18 (4), pp. 366 - 368 (2021)

Srikant, T.; Drost, H.-G.: How Stress Facilitates Phenotypic Innovation Through Epigenetic Diversity. Frontiers in Plant Science 11, 606800 (2021)

Drost, H.-G.: LTRpred: de novo annotation of intact retrotransposons. The Journal of Open Source Software 5 (50), 2170 (2020)

Exposito-Alonso, M.; Drost, H.-G.; Burbano, H.; Weigel, D.: The Earth BioGenome project: opportunities and challenges for plant genomics and conservation. The Plant Journal 102 (2), pp. 222 - 229 (2020)

Drost, H.-G.; Sanchez, D.: Becoming a Selfish Clan: Recombination Associated to Reverse-Transcription in LTR Retrotransposons. Genome Biology and Evolution 11 (12), pp. 3382 - 3392 (2019)

Arumugam, K.; Bağci, C.; Bessarab, I.; Beier, S.; Buchfink, B.; Górska, A.; Qiu, G.; Huson, D.; Williams, R.: Annotated bacterial chromosomes from frame-shift-corrected long-read metagenomic data. Microbiome 7, 61 (2019)

Benoit, M.; Drost, H.-G.: A Predictive Approach to Infer the Activity and Natural Variation of Retrotransposon Families in Plants. In: Methods in Molecular Biology, Vol. 2250. Springer, US (2021)

Drost, H.-G.: How ancient genes dominate key developmental transitions in organisms across the tree of life. In EURO EVO DEVO 2024, S14.3, p. 186. European Society for Evolutionary Developmental Biology EURO EVO DEVO 2024 (EED 2024), Helsinki, Finland, June 25, 2024 - June 28, 2024. (2024)

Lotharukpong, J.; Zheng, M.; Luthringer, R.; Drost, H.-G.; Coelho, S.: A transcriptomic hourglass in brown algae. In EURO EVO DEVO 2024, C01.3, p. 58. European Society for Evolutionary Developmental Biology EURO EVO DEVO 2024 (EED 2024), Helsinki, Finland, June 25, 2024 - June 28, 2024. (2024)

Teasdale, L.; Shirsekar, G.; Collenberg, M.; Murray, K.; Contreras-Garrido, A.; Schlegel, T.; van Ess, L.; Juettner, j.; Lanz, C.; Deusch, O. et al.; Fitz, J.; Mencia, R.; Velthoven, R.; Drost, H.-G.; Weigel, D.: Birth, Death, and Persistence in NLR Diversity in the Arabidopsis Immune System. In 12th International Congress of Plant Pathology (ICPP 2023), P5.5-010, p. 385. 12th International Congress of Plant Pathology (ICPP 2023), Lyon, France, August 20, 2023 - August 25, 2023. (2023)