Publications
^{_{Ciliate Genomics and Molecular Biology}}

Singh, A.; Maurer-Alcalá, X.; Solberg, T.; Haeussermann, L.; Gisler, S.; Ignarski , M.; Swart, E.; Nowacki, M.: Chromatin remodeling is required for sRNA-guided DNA elimination in Paramecium. EMBO Journal 41 (22), e111839 (2022)

Seah, B.; Emmerich, C.; Singh, A.; Swart, E.: Improved methods for bulk cultivation and fixation of Loxodes ciliates for fluorescence microscopy. Protist 173 (5), 125905 (2022)

Wang, C.; Solberg, T.; Maurer-Alcalá, X.; Swart, E.; Gao, F.; Nowacki, M.: A small RNA-guided PRC2 complex eliminates DNA as an extreme form of transposon silencing. Cell Reports 40 (8), 111263 (2022)

Seah, B.; Singh, A.; Swart, E.: Karyorelict ciliates use an ambiguous genetic code with context-dependent stop/sense codons. Peer Community Journal 2, e42 (2022)

Rzeszutek, I.; Swart, E.; Pabian-Jewuła, S.; Russo, A.; Nowacki, M.: Early developmental, meiosis-specific proteins - Spo11, Msh4-1, and Msh5 - Affect subsequent genome reorganization in Paramecium tetraurelia. Biochimica et Biophysica Acta: Molecular Cell Research 1869 (6), 119239 (2022)

Seah, B.; Singh, A.; Vetter, D.; Emmerich, C.; Peters, M.; Soltys, V.; Huettel, B.; Swart, E.: Evidence for ciliates without extensive DNA elimination: the karyorelict Loxodes magnus. In The 41st Annual Meeting of the DGP, p. 25. The 41st Annual Meeting of the German Society for Protozoology (DGP 2022), Bergisch Gladbach, Germany, July 12, 2022 - July 15, 2022. (2022)

Singh, M.; Seah, B.; Emmerich, C.; Singh, A.; Woehle, C.; Huettel, B.; Byerly, A.; Stover, N.; Sugiura, M.; Harumoto, C. et al.; Swart, E.: Genome editing excisase origins illuminated by somatic genome of the ciliate Blepharisma. In The 41st Annual Meeting of the DGP, p. 26. The 41st Annual Meeting of the German Society for Protozoology (DGP 2022), Bergisch Gladbach, Germany, July 12, 2022 - July 15, 2022. (2022)

Swart, E.: RNA-seq bioinformatics for "non-model" protists. In The 41st Annual Meeting of the DGP, p. 17. The 41st Annual Meeting of the German Society for Protozoology (DGP 2022), Bergisch Gladbach, Germany, July 12, 2022 - July 15, 2022. (2022)

Singh, A.; Häußermann, L.; Emmerich, C.; Seah, B.; Nowacki, M.; Swart, E.: Resolving the composition of a chromatin remodelling complex participating in Paramecium genome rearrangement. The 41st Annual Meeting of the German Society for Protozoology (DGP 2022), Bergisch Gladbach, Germany (2022)

Gruber-Vodicka, H.; Jäckle, O.; Seah, B.: Symbiont rejuvenation in an ancient nutritional symbiosis? Clade specific evolution of the chemosynthetic Ca. Riegeria symbionts is linked to rare host switching in the mouthless marine flatworm Paracatenula. Annual Conference of the Association for General and Applied Microbiology (VAAM 2022) Digital, Düsseldorf/Jülich, Germany (2022)

Singh, M.: Analysis of the somatic and germline genomes of the ciliate Blepharisma stoltei. Dissertation, 205 pp., Eberhard-Karls-Universität, Tübingen, Germany (2022)

Seah, B.: Swart-lab/bleties-test-ptet. (2022)

Seah, B.: Swart-lab/bleties-test-tthe. (2022)

Seah, B.: Swart-lab/karyocode-analysis-busco. (2022)

Seah, B.: Swart-lab/karyocode-analysis-porc. (2022)

Seah, B.: Swart-lab/karyocode-workflow. (2022)

Seah, B.; Emmerich, C.; Singh, A.; Swart, E.: Soil extract medium for Loxodes culture. (2022)

Seah, B.; Singh, A.; Swart, E.: 18S rRNA phylogeny for ciliate single cell environmental samples. (2022)

Seah, B.; Singh, A.; Swart, E.: Dataset accessions for comparative analysis of ciliate genetic codes. (2022)

Seah, B.; Singh, M.; Swart, E.: Blepharisma stoltei IES predictions and micronuclear genome assembly. (2022)