Publications of G Rätsch
All genres
Journal Article (25)
1.
Journal Article
19 (5), e1011001 (2023)
ResMiCo: increasing the quality of metagenome-assembled genomes with deep learning. PLoS Computational Biology 2.
Journal Article
34 (2), pp. 211 - 224 (2018)
Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients. Cancer Cell 3.
Journal Article
159 (6), pp. 1341 - 1351 (2014)
Species-wide Genetic Incompatibility Analysis Identifies Immune Genes as Hot Spots of Deleterious Epistasis. Cell 4.
Journal Article
8 (8), e1002856 (2012)
Cohesin rings devoid of Scc3 and Pds5 maintain their stable association with the DNA. PLoS Genetics 5.
Journal Article
9 (5), pp. 596 - 609 (2012)
Multiple insert size paired-end sequencing for deconvolution of complex transcriptomes. RNA Biology 6.
Journal Article
477 (7365), pp. 419 - 423 (2011)
Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature 7.
Journal Article
12, 55 (2011)
Support vector machines-based identification of alternative splicing in Arabidopsis thaliana from whole-genome tiling arrays. BMC Bioinformatics 8.
Journal Article
21 (2), pp. 325 - 341 (2011)
A spatial and temporal map of C. elegans gene expression. Genome Research 9.
Journal Article
108 (1), pp. 254 - 259 (2011)
Receptor-type guanylate cyclase is required for carbon dioxide sensation by Caenorhabditis elegans. Proceedings of the National Academy of Sciences of the United States of America 10.
Journal Article
330 (6012), pp. 1775 - 1787 (2010)
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science 11.
Journal Article
107 (41), pp. 17466 - 17573 (2010)
Global effects of the small RNA biogenesis machinery on the Arabidopsis thaliana transcriptome. Proceedings of the National Academy of Sciences of the United States of America 12.
Journal Article
2010 (2010)
Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts. Nature Precedings 13.
Journal Article
19 (11), pp. 2133 - 2143 (2009)
mGene: Accurate SVM-based gene finding with an application to nematode genomes. Genome Research 14.
Journal Article
25 (16), pp. 2126 - 2133 (2009)
KIRMES: kernel-based identification of regulatory modules in euchromatic sequences. Bioinformatics 15.
Journal Article
106 (30), pp. 12273 - 12278 (2009)
Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences of the United States of America 16.
Journal Article
37 (Supplement 2), pp. W312 - W316 (2009)
mGene.web: a web service for accurate computational gene finding. Nucleic Acids Research (London) 17.
Journal Article
58 (6), pp. 1068 - 1082 (2009)
Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole-genome tiling arrays. The Plant Journal 18.
Journal Article
57 (1), pp. 184 - 194 (2009)
Quantitative RNA expression analysis with Affymetrix Tiling 1.0R arrays identifies new E2F target. The Plant Journal 19.
Journal Article
57 (1), pp. 184 - 194 (2009)
Quantitative RNA expression analysis with Affymetrix Tiling 1.0R arrays identifies new E2F target genes. The Plant Journal 20.
Journal Article
24 (16), pp. i174 - i180 (2008)
Optimal spliced alignments of short sequence reads. Bioinformatics