Publications of M Hoffmann

Fraser, B.; Whiting, J.; Paris, J.; Weadick, C.; Parsons, P.; Charlesworth, D.; Bergero, R.; Bemm, F.; Hoffmann, M.; Kottler, V. et al.; Liu, C.; Dreyer, C.; Weigel, D.: Improved Reference Genome Uncovers Novel Sex-Linked Regions in the Guppy (Poecilia reticulata). Genome Biology and Evolution 12 (10), pp. 1789 - 1805 (2020)

Künstner, A.; Hoffmann, M.; Fraser, B.; Kottler, V.; Sharma, E.; Weigel, D.; Dreyer, C.: The genome of the trinidadian guppy, Poecilia reticulata, and variation in the Guanapo population. PLoS One 11 (12), e0169087 (2016)

Humble, E.; Martinez-Barrio, A.; Forcada, J.; Trathan, P.; Thorne, M.; Hoffmann, M.; Wolf, J.; Hoffman, J.: A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them. Molecular Ecology Resources 16 (4), pp. 909 - 921 (2016)

Kottler, V.; Künstner, A.; Koch, I.; Flötenmeyer, M.; Langenecker, T.; Hoffmann, M.; Sharma, E.; Weigel, D.; Dreyer, C.: Adenylate cyclase 5 is required for melanophore and male pattern development in the guppy (Poecilia reticulata). Pigment Cell & Melanoma Research 28 (5), pp. 545 - 558 (2015)

Warren, R.; Keeling, C.; Man Saint Yuen, M.; Raymond, A.; Taylor, G.; Vandervalk, B.; Mohamadi, H.; Paulino, D.; Chiu, R.; Jackman, S. et al.; Robertson, G.; Yang, C.; Boyle, B.; Hoffmann, M.; Weigel, D.; Nelson, D.; Ritland, C.; Isabel, N.; Jaquish, B.; Yanchuk, A.; Bousquet, J.; Jones, S.; MacKay, J.; Birol, I.; Bohlmann, J.: Improved white spruce (Picea glauca) genome assemblies and annotation of large gene families of conifer terpenoid and phenolic defense metabolism. The Plant Journal 83 (2), pp. 189 - 212 (2015)

Sievers, C.; Willing, E.-M.; Hoffmann, M.; Dreyer, C.; Ramnarine, I.; Magurran, A.: Reasons for the invasive success of a guppy (Poecilia reticulata) population in Trinidad. PLoS One 7 (5), e0038404 (2012)

Willing, E.-M.; Hoffmann, M.; Klein, J.; Weigel, D.; Dreyer, C.: Paired-end RAD-seq for de novo assembly and marker design without available reference. Bioinformatics 27 (16), pp. 2187 - 2193 (2011)

Watson, C.; Gray, S.; Hoffmann, M.; Lubieniecki, K.; Joy, J.; Sandkam, B.; Weigel, D.; Loew, E.; Dreyer, C.; Davidson, W. et al.; Breden, F.: Gene duplication and divergence of long wavelength-sensitive opsin genes in the guppy, Poecilia reticulata. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution 72 (2), pp. 240 - 252 (2011)

Willing, E.-M.; Bentzen, P.; van Oosterhout, C.; Hoffmann, M.; Cable, J.; Breden, F.; Weigel, D.; Dreyer, C.: Genome-wide single nucleotide polymorphisms reveal population history and adaptive divergence in wild guppies. Molecular Ecology 19 (5), pp. 968 - 984 (2010)

Tripathi, N.; Hoffmann, M.; Willing, E.-M.; Lanz, C.; Weigel, D.; Dreyer, C.: Genetic linkage map of the guppy, Poecilia reticulata, and quantitative trait loci analysis of male size and colour variation. Proceedings of the Royal Society B: Biological Sciences 276 (1665), pp. 2195 - 2208 (2009)

Tripathi, N.; Hoffmann, M.; Weigel, D.; Dreyer, C.: Linkage analysis reveals the independent origin of Poeciliid sex chromosomes and a case of atypical sex inheritance in the guppy (Poecilia reticulata). Genetics 182 (1), pp. 365 - 374 (2009)

Tripathi, N.; Hoffmann, M.; Dreyer, C.: Natural variation of male ornamental traits of the guppy, Poecilia reticulata. Zebrafish 5 (4), pp. 265 - 278 (2008)

Dreyer, C.; Hoffmann, M.; Lanz, C.; Willing, E.-M.; Riester, M.; Warthmann, N.; Sprecher, A.; Tripathi, N.; Henz, S.; Weigel, D.: ESTs and EST-linked polymorphisms for genetic mapping and phylogenetic reconstruction in the guppy, Poecilia reticulata. BMC Genomics 8, 269 (2007)

Hoffmann, M.; Tripathi, N.; Henz, S.; Lindholm, A.; Weigel, D.; Breden, F.; Dreyer, C.: Opsin gene duplication and diversification in the guppy, a model for sexual selection. Proceedings of the Royal Society of London. Series B: Biological Sciences (London) 274 (1606), pp. 33 - 42 (2007)

Künstner, A.; Hoffmann, M.; Medina, P.; Kottler, V.; Weigel, D.; Chan, F.; Dreyer, C.: The genomics and genetics of male ornaments and sex determination supergene in the Trinidadian guppy Poecilia reticulata. 15th Congress of the European Society for Evolutionary Biology (ESEB 2015), Lausanne, Switzerland (2015)

Willing, E.-M.; Hoffmann, M.; Weigel, D.; Dreyer, C.: Complex hierarchical population subdivision in guppies from Trinidad and Venezuela revealed by high-density marker analyses. 17th Annual International Conference on Intelligent Systems for Molecular Biology & 8th European Conference on Computational Biology (ISMB ECCB 2009), Stockholm, Sweden (2009)