Publications of O Kohlbacher
All genres
Journal Article (91)
61.
Journal Article
8 (27), pp. 43915 - 43924 (2017)
A meta-analysis of HLA peptidome composition in different hematological entities: entity-specific dividing lines and "panleukemia" antigens. Oncotarget 62.
Journal Article
16 (7), pp. 1275 - 1285 (2017)
The mzIdentML Data Standard Version 1.2, Supporting Advances in Proteome Informatics. Molecular and Cellular Proteomics 63.
Journal Article
6, ELIXIR-875 (2017)
A community proposal to integrate proteomics activities in ELIXIR. F1000Research 64.
Journal Article
18, 242 (2017)
ImmunoNodes: graphical development of complex immunoinformatics workflows. BMC Bioinformatics 65.
Journal Article
150, pp. 170 - 182 (2017)
In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics. Journal of Proteomics 66.
Journal Article
66 (1), pp. 252 - 253 (2017)
Erratum to "Personalized peptide vaccine-induced immune response associated with long-term survival of a metastatic cholangiocarcinoma patient". Journal of Hepatology 67.
Journal Article
12 (12), e1006071 (2016)
Structural and Functional Characterization of the Bacterial Type III Secretion Export Apparatus. PLoS Pathogens 68.
Journal Article
5 (12), e1249560 (2016)
Distinct transcriptional changes in non-small cell lung cancer patients associated with multi-antigenic RNActive® CV9201 immunotherapy. Oncoimmunology 69.
Journal Article
65 (4), pp. 849 - 855 (2016)
Personalized peptide vaccine-induced immune response associated with long-term survival of a metastatic cholangiocarcinoma patient. Journal of Hepatology 70.
Journal Article
13, 49 (2016)
Copper oxide nanoparticle toxicity profiling using untargeted metabolomics. Particle and Fibre Toxicology 71.
Journal Article
15 (9), pp. 3441 - 3448 (2016)
LFQProfiler and RNP(xl): Open-Source Tools for Label-Free Quantification and Protein-RNA Cross-Linking Integrated into Proteome Discoverer. Journal of Proteome Research 72.
Journal Article
13 (8), pp. 651 - 656 (2016)
Recognizing millions of consistently unidentified spectra across hundreds of shotgun proteomics datasets. Nature Methods 73.
Journal Article
13 (9), pp. 741 - 748 (2016)
OpenMS: a flexible open-source software platform for mass spectrometry data analysis. Nature Methods 74.
Journal Article
32 (13), pp. 2044 - 2046 (2016)
FRED 2: an immunoinformatics framework for Python. Bioinformatics 75.
Journal Article
32 (12), pp. 1888 - 1890 (2016)
BALL-SNPgp-from genetic variants toward computational diagnostics. Bioinformatics 76.
Journal Article
12 (5), e1004920 (2016)
Learning from Heterogeneous Data Sources: An Application in Spatial Proteomics. PLoS Computational Biology 77.
Journal Article
6 (4), e411 (2016)
Carfilzomib alters the HLA-presented peptidome of myeloma cells and impairs presentation of peptides with aromatic C-termini. Blood Cancer Journal 78.
Journal Article
138 (7), pp. 1765 - 1776 (2016)
DrugTargetInspector: An assistance tool for patient treatment stratification. International Journal of Cancer 79.
Journal Article
15 (3), pp. 809 - 814 (2016)
Testing and Validation of Computational Methods for Mass Spectrometry. Journal of Proteome Research 80.
Journal Article
15 (3), pp. 681 - 682 (2016)
Challenges in Large-Scale Computational Mass Spectrometry and Multiomics. Journal of Proteome Research