Publications
Computational Biology Group
Journal Article (28)
1.
Journal Article
JS Lotharukpong, M Zheng, R Luthringer, D Liesner, H-G Drost, and SM Coelho, "A Transcriptomic Hourglass In Brown Algae," Nature 635 (8037), 129-135 (2024).
2.
Journal Article
H-G Drost, "How ancient genes form animal body plans," Nature Reviews Genetics 25 (7), 458 (2024).
3.
Journal Article
H-G Drost, "Unveiling the expanding protein universe of life," Nature Reviews Genetics 25 (5), 306 (2024).
4.
Journal Article
A Contreras-Garrido, D Galanti, A Movilli, C Becker, O Bossdorf, H-G Drost, and D Weigel, "Transposon dynamics in the emerging oilseed crop Thlaspi arvense," PLOS Genetics 20 (1), e1011141 (2024).
5.
Journal Article
A Grigorjew, A Gynter, F Dias, B Buchfink, H-G Drost, and AI Tomescu, "Sensitive inference of alignment-safe intervals from biodiverse protein sequence clusters using EMERALD," Genome Biology: Biology for the Post-Genomic Era 24 (1), 168 (2023).
6.
Journal Article
J Barrera-Redondo, JS Lotharukpong, H-G Drost, and SM Coelho, "Uncovering gene-family founder events during major evolutionary transitions in animals, plants and fungi using GenEra," Genome Biology 24 (1), 54 (2023).
7.
Journal Article
T Srikant, W Yuan, KW Berendzen, A Contreras Garrido, H-G Drost, R Schwab, and D Weigel, "Canalization of genome-wide transcriptional activity in Arabidopsis thaliana accessions by MET1-dependent CG methylation," Genome Biology 23 (1), 263 (2022).
8.
Journal Article
E Cerruti, C Gisbert, H-G Drost, D Valentino, D Valentino, E Portis, L Barchi, J Prohens, S Lanteri, C Comino, and M Catoni, "Grafting vigour is associated with DNA de-methylation in eggplant," Horticulture Research 8 (1), 241 (2021).
9.
Journal Article
I Moutsopoulos, L Maischak, E Lauzikaite, SA Vasquez Urbina, EC Williams, H-G Drost, and II Mohorianu, "noisyR: enhancing biological signal in sequencing datasets by characterizing random technical noise," Nucleic Acids Research 49 (14), e83 (2021).
10.
Journal Article
B Buchfink, K Reuter, and H-G Drost, "Sensitive protein alignments at tree-of-life scale using DIAMOND," Nature methods 18 (4), 366-368 (2021).
11.
Journal Article
T Srikant and H-G Drost, "How Stress Facilitates Phenotypic Innovation Through Epigenetic Diversity," Frontiers in Plant Science 11, 606800 (2021).
12.
Journal Article
H-G Drost, "LTRpred: de novo annotation of intact retrotransposons," The Journal of Open Source Software 5 (50), 2170 (2020).
13.
Journal Article
M Exposito-Alonso, H-G Drost, HA Burbano, and D Weigel, "The Earth BioGenome project: opportunities and challenges for plant genomics and conservation," The Plant Journal 102 (2), 222-229 (2020).
14.
Journal Article
H-G Drost and DH Sanchez, "Becoming a Selfish Clan: Recombination Associated to Reverse-Transcription in LTR Retrotransposons," Genome Biology and Evolution 11 (12), 3382-3392 (2019).
15.
Journal Article
M Benoit, H-G Drost, M Catoni, Q Gouil, S Lopez-Gomollon, D Baulcombe, and J Paszkowski, "Environmental and epigenetic regulation of Rider retrotransposons in tomato," PLoS Genetics 15 (9), e1008370 (2019).
16.
Journal Article
J Cho, M Benoit, M Catoni, H-G Drost, A Brestovitsky, M Oosterbeek, and J Paszkowski, "Sensitive detection of pre-integration intermediates of long terminal repeat retrotransposons in crop plants," Nature Plants 5 (1), 26-33 (2019).
17.
Journal Article
A Gogleva, H-G Drost, and S Schorlack, "SecretSanta: flexible pipelines for functional secretome prediction," Bioinformatics 34 (13), 2295-2296 (2018).
18.
Journal Article
H-G Drost, "Philentropy: Information Theory and Distance Quantification with R," The Journal of Open Source Software 3 (26), 765 (2018).
19.
Journal Article
H-G Drost, A Gabel, J Liu, M Quint, and I Grosse, "myTAI: evolutionary transcriptomics with R," Bioinformatics 34 (9), 1589-1590 (2018).
20.
Journal Article
DH Sanchez, H Gaubert, H-G Drost, NR Zabet, and J Paszkowski, "High-frequency recombination between members of an LTR retrotransposon family during transposition bursts," Nature Communications 8 (1), 1283 (2017).