Publications of BKB Seah

Seah, B.; Swart, E.: When cleaning facilitates cluttering: genome editing in ciliates. Trends in Genetics 39 (5), pp. 344 - 346 (2023)

Seah, B.; Singh, M.; Emmerich, C.; Singh, A.; Woehle, C.; Huettel, B.; Byerly, A.; Stover, N.; Sugiura, M.; Harumoto, T. et al.; Swart, E.: MITE infestation accommodated by genome editing in the germline genome of the ciliate Blepharisma. Proceedings of the National Academy of Sciences of the United States of America 120 (4), e2213985120 (2023)

Singh, M.; Seah, B.; Emmerich, C.; Singh, A.; Woehle, C.; Huettel, B.; Byerly, A.; Stover, N.; Sugiura, M.; Harumoto, T. et al.; Swart, E.: Origins of genome-editing excisases as illuminated by the somatic genome of the ciliate Blepharisma. Proceedings of the National Academy of Sciences of the United States of America 120 (4), e2213887120 (2023)

Seah, B.; Emmerich, C.; Singh, A.; Swart, E.: Improved methods for bulk cultivation and fixation of Loxodes ciliates for fluorescence microscopy. Protist 173 (5), 125905 (2022)

Seah, B.; Singh, A.; Swart, E.: Karyorelict ciliates use an ambiguous genetic code with context-dependent stop/sense codons. Peer Community Journal 2, e42 (2022)

Seah, B.; Swart, E.: BleTIES: Annotation of natural genome editing in ciliates using long read sequencing. Bioinformatics 37 (21), btab613, pp. 3929 - 3931 (2021)

Sayavedra, L.; Li, T.; Bueno Batista, M.; Seah, B.; Booth, C.; Zhai, Q.; Chen, W.; Narbad, A.: Desulfovibrio diazotrophicus sp. nov., a sulfate-reducing bacterium from the human gut capable of nitrogen fixation. Environmental Microbiology 23 (6), pp. 3164 - 3181 (2021)

Shaikhutdinov, N.; Seah, B.; Emmerich, C.; Moeller, H.; Paight, C.; Johnson, M.; Swart, E.: Absence of spliceosomal introns in the mixotrophic ciliate Mesodinium rubrum: how did they disappear? In SMBE 2023, p. 443. Society for Molecular Biology and Evolution Conference 2023 (SMBE 2023), Ferrara, Italy, July 23, 2023 - July 27, 2023. (2023)

Seah, B.; Singh, A.; Vetter, D.; Emmerich, C.; Peters, M.; Soltys, V.; Huettel, B.; Swart, E.: Evidence for ciliates without extensive DNA elimination: the karyorelict Loxodes magnus. In The 41st Annual Meeting of the DGP, p. 25. The 41st Annual Meeting of the German Society for Protozoology (DGP 2022), Bergisch Gladbach, Germany, July 12, 2022 - July 15, 2022. (2022)

Singh, M.; Seah, B.; Emmerich, C.; Singh, A.; Woehle, C.; Huettel, B.; Byerly, A.; Sover, N.; Sugiura, M.; Harumoto, C. et al.; Swart, E.: Genome editing excisase origins illuminated by somatic genome of the ciliate Blepharisma. In The 41st Annual Meeting of the DGP, p. 26. The 41st Annual Meeting of the German Society for Protozoology (DGP 2022), Bergisch Gladbach, Germany, July 12, 2022 - July 15, 2022. (2022)

Shaikhutdinov, N.; Seah, B.; Emmerich, C.; Moeller, H.; Paight, C.; Johnson, M.; Swart, E.: Absence of spliceosomal introns in the mixotrophic ciliate Mesodinium rubrum: how did they disappear? IX. ECOP-ISOP Joint Meeting "The Century of Protists", Wien, Austria (2023)

Singh, A.; Häußermann, L.; Emmerich, C.; Seah, B.; Nowacki, M.; Swart, E.: Resolving the composition of a chromatin remodelling complex participating in Paramecium genome rearrangement. The 41st Annual Meeting of the German Society for Protozoology (DGP 2022), Bergisch Gladbach, Germany (2022)

Gruber-Vodicka, H.; Jäckle, O.; Seah, B.: Symbiont rejuvenation in an ancient nutritional symbiosis? Clade specific evolution of the chemosynthetic Ca. Riegeria symbionts is linked to rare host switching in the mouthless marine flatworm Paracatenula. Annual Conference of the Association for General and Applied Microbiology (VAAM 2022) Digital, Düsseldorf/Jülich, Germany (2022)

Sayavedra, L.; Bueno Batista, M.; Seah, B.; Booth, C.; Zhai, Q.; Chen, W.; Narbad, A.: Desulfovibrio diazotrophica sp. nov., a Sulphate Reducing Bacterium from the Human Gut Capable of Nitrogen Fixation. World Microbe Forum 2021 (2021)

Swart, E.; Emmerich, C.; Seah, B.; Singh, M.; Shulgina, Y.; Singh, A.: How did UGA codon translation as tryptophan evolve in certain ciliates? A critique of Kachale et al. 2023 Nature. (2024)

Seah, B.; Singh, A.; Vetter, D.; Emmerich, C.; Peters, M.; Soltys, V.; Huettel, B.; Swart, E.: Nuclear dualism without extensive DNA elimination in the ciliate Loxodes magnus. (submitted)

Singh, A.; Häußermann, L.; Emmerich, C.; Nischwitz, E.; Seah, B.; Butter, F.; Nowacki, M.; Swart, E.: ISWI1 complex proteins facilitate developmental genome editing in Paramecium. (submitted)