Publications of D Weigel

Guo, Y.-L.; Zhao, X.; Lanz, C.; Weigel, D.: Evolution of the S-locus region in Arabidopsis relatives. Plant Physiology 157 (2), pp. 937 - 946 (2011)

Davila, J.; Arrieta-Montiel, M.; Wamboldt, Y.; Cao, J.; Hagmann, J.; Shedge, V.; Xu, Y.-Z.; Weigel, D.; Mackenzie, S.: Double-strand break repair processes drive evolution of the mitochondrial genome in Arabidopsis. BMC Biology 9, 64 (2011)

Klein, J.; Ossowski, S.; Schneeberger, K.; Weigel, D.; Huson, D.: LOCAS: A Low Coverage Assembly Tool for Resequencing Projects. PLOS ONE 6 (8), e23455 (2011)

Willing, E.-M.; Hoffmann, M.; Klein, J.; Weigel, D.; Dreyer, C.: Paired-end RAD-seq for de novo assembly and marker design without available reference. Bioinformatics 27 (16), pp. 2187 - 2193 (2011)

Rowan, B.; Weigel, D.; Koenig, D.: Developmental genetics and new sequencing technologies: the rise of nonmodel organisms. Developmental Cell 21 (1), pp. 65 - 76 (2011)

Smith, L.; Bomblies, K.; Weigel, D.: Complex evolutionary events at a tandem cluster of Arabidopsis thaliana genes resulting in a single-locus genetic incompatibility. PLoS Genetics 7 (7), e1002164 (2011)

Salomé, P.; Bomblies, K.; Laitinen, R.; Yant, L.; Mott, R.; Weigel, D.: Genetic architecture of flowering-time variation in Arabidopsis thaliana. Genetics 188 (2), pp. 421 - 433 (2011)

Schneeberger, K.; Ossowski, S.; Ott, F.; Klein, J.; Wang, X.; Lanz, C.; Smith, L.; Cao, J.; Fitz, J.; Warthmann, N. et al.; Henz, S.; Huson, D.; Weigel, D.: Reference-guided assembly of four diverse Arabidopsis thaliana genomes. Proceedings of the National Academy of Sciences of the United States of America 108 (25), pp. 10249 - 10254 (2011)

Hu, T.; Pattyn, P.; Bakker, E.; Cao, J.; Cheng, J.-F.; Clark, R.; Fahlgren, N.; Fawcett, J.; Grimwood, J.; Gundlach, A. et al.; Haberer, D.; Hollister, J.; Ossowski, S.; Ottilar, R.; Salamov, A.; Schneeberger, K.; Spannagl, M.; Wang, X.; Yang, L.; Nasrallah, M.; Bergelson, J.; Carrington, J.; Gaut, B.; Schmutz, J.; Mayer, K.; Van de Peer, Y.; Grigoriev, I.; Nordborg, M.; Weigel, D.; Guo, Y.-L.: The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nature Genetics 43 (5), pp. 476 - 481 (2011)

Rubio-Somoza, I.; Weigel, D.: MicroRNA networks and developmental plasticity in plants. Trends in Plant Science 16 (5), pp. 258 - 264 (2011)

Schneeberger, K.; Weigel, D.: Fast-forward genetics enabled by new sequencing technologies. Trends in Plant Science 16 (5), pp. 282 - 288 (2011)

Sonmez, C.; Bäurle, I.; Magusin, A.; Dreos, R.; Laubinger, S.; Weigel, D.; Dean, C.: RNA 3' processing functions of Arabidopsis FCA and FPA limit intergenic transcription. Proceedings of the National Academy of Sciences of the United States of America 108 (20), pp. 8508 - 8513 (2011)

Fenselau de Felippes, F.; Ott, F.; Weigel, D.: Comparative analysis of non-autonomous effects of tasiRNAs and miRNAs in Arabidopsis thaliana. Nucleic Acids Research (London) 39 (7), pp. 2880 - 2889 (2011)

Gou, J.-Y.; Felippes, F.; Liu, C.-L.; Weigel, D.; Wang, J.-W.: Negative regulation of anthocyanin biosynthesis in Arabidopsis by a miR156-targeted SPL transcription factor. Plant Cell 23 (4), pp. 1512 - 1522 (2011)

Manavella, P.; Weigel, D.; Wu, L.: Argonaute10 as a miRNA locker. Cell 145 (2), pp. 173 - 174 (2011)

Moyroud, E.; Gómez Minguet, E.; Ott, F.; Yant, L.; Posé, D.; Monniaux, M.; Blanchet, S.; Bastien, O.; Thévenon, E.; Weigel, D. et al.; Schmid, M.; Parcy, F.: Prediction of regulatory interactions from genome sequences using a biophysical model for the Arabidopsis LEAFY transcription factor. Plant Cell 23 (4), pp. 1293 - 1306 (2011)

Salomé, P.; Bomblies, K.; Fitz, J.; Laitinen, R.; Yant, L.; Weigel, D.: The recombination landscape in Arabidopsis thaliana F2 populations. Heredity 108 (4), pp. 447 - 455 (2011)

Hollister, J.; Smith, L.; Guo, Y.-L.; Ott, F.; Weigel, D.; Gaut, B.: Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata. Proceedings of the National Academy of Sciences of the United States of America 108 (6), pp. 2322 - 2327 (2011)

Wang, J.-W.; Park, M.-Y.; Wang, L.; Koo, Y.; Chen, X.-Y.; Weigel, D.; Poethig, R.: miRNA control of vegetative phase change in trees. PLoS Genetics 7 (2), e1002012 (2011)

Watson, C.; Gray, S.; Hoffmann, M.; Lubieniecki, K.; Joy, J.; Sandkam, B.; Weigel, D.; Loew, E.; Dreyer, C.; Davidson, W. et al.; Breden, F.: Gene duplication and divergence of long wavelength-sensitive opsin genes in the guppy, Poecilia reticulata. Journal of Molecular Evolution: the Journal of the International Society of Molecular Evolution 72 (2), pp. 240 - 252 (2011)