Publications

Barragan, A.; Collenberg, M.; Schwab, R.; Kersten, S.; Kerstens, M.; Požárová, D.; Bezrukov, I.; Bemm, F.; Kolár, F.; Weigel, D.: Deleterious Phenotypes in Wild Arabidopsis arenosa Populations Are Common and Linked to Runs of Homozygosity. G3: Genes, Genomes, Genetics 14 (3), jkad290 (2024)

Chen, J.; Li, L.; Kim, J.; Neuhäuser, B.; Wang, M.; Thelen, M.; Hilleary, R.; Chi, Y.; Wei, L.; Venkataramani, K. et al.; Exposito-Alonso, M.; Liu, C.; Keck, J.; Barragan, A.; Schwab, R.; Lutz, U.; Pei, Z.-M.; He, S.-Y.; Ludewig, U.; Weigel, D.; Zhu, W.: Small proteins modulate ion-channel-like ACD6 to regulate immunity in Arabidopsis thaliana. Molecular Cell 83 (23), pp. 4386 - 4397 (2023)

Srikant, T.; Yuan, W.; Berendzen, K.; Contreras Garrido, A.; Drost, H.-G.; Schwab, R.; Weigel, D.: Canalization of genome-wide transcriptional activity in Arabidopsis thaliana accessions by MET1-dependent CG methylation. Genome Biology 23 (1), 263 (2022)

Symeonidi, E.; Regalado, J.; Schwab, R.; Weigel, D.: CRISPR-finder: A high throughput and cost-effective method to identify successfully edited Arabidopsis thaliana individuals. Quantitative Plant Biology 2, e1 (2021)

Karasov, T.; Shirsekar, G.; Schwab, R.; Weigel, D.: What natural variation can teach us about resistance durability. Current Opinion in Plant Biology 56, pp. 89 - 98 (2020)

Lucke, M.; Ashkenazy, H.; Teasdale, L.; Paul, F.; Collenberg, M.; Schlegel, T.; Schwab, R.; Weigel, D.: On the relationship between alleles of the immune receptor RPP1 and its oomycete effector ligand ATR1. In 34th International Conference on Arabidopsis Research (ICAR 2024), P9-6, p. 580. 34th International Conference on Arabidopsis Research (ICAR 2024), San Diego, CA, USA, July 15, 2024 - July 19, 2024. (2024)

Murray, K.; Shirsekar, G.; Paul, F.; González-Hernando, A.; Schwab, R.; Tahtsidou, C.; Deusch, O.; Dürr, H.; Kontos, I.; Karawounopoulos, S. et al.; Velthoven, R.; Lanz, C.; Collenberg, M.; The Pathodopsis Team; Weigel, D.: The Coevolutionary race between Hyaloperonospora Arabidopsidis and Arabidopsis Thaliana at a Transcontinental Scale. In 12th International Congress of Plant Pathology (ICPP 2023), C2.3-2, pp. 813 - 814. 12th International Congress of Plant Pathology (ICPP 2023), Lyon, France, August 20, 2023 - August 25, 2023. (2023)

Murray, K.; Shirsekar, G.; Paul, F.; González Hernando, A.; Schwab, R.; Tahtsidou, C.; Deusch, O.; Dürr, H.; Kontos, I.; Marotz, A. et al.; Karawounopoulos, S.; Velthoven, R.; Lucke, M.; Lanz, C.; Collenberg, M.; Pathodopsis Team; Weigel, D.: The coevolutionary race between Hyaloperonospora arabidopsidis and Arabidopsis thaliana at a transcontinental scale. In SMBE 2023, p. 161. Society for Molecular Biology and Evolution Conference 2023 (SMBE 2023), Ferrara, Italy, July 23, 2023 - July 27, 2023. (2023)

Shirsekar, G.; Murray, K.; Paul, F.; Schwab, R.; Tahtsidou, C.; Velthoven, R.; Deusch, O.; Teasdale, L.; Collenberg, M.; Pathodopsis Team et al.; Weigel, D.: Entangled co-evolutionary history of Hyaloperonospora arabidopsidis and its host Arabidopsis thaliana. In 21st Annual Meeting of the Oomycete Molecular Genetics Network (OMGN 2022), 7.1, p. 35. 21st Annual Meeting of the Oomycete Molecular Genetics Network (OMGN 2022), Brno, Czech Republic, August 22, 2022 - August 25, 2022. (2022)

Karasov, T.; Neumann, M.; Shirsekar, G.; Monroe, G.; Schwab, R.; Weigel, D.: Host and Environmental Drivers of Phyllosphere Composition across Europe. In Harnessing the Plant Microbiome: Virtual Conference, p. 36. Harnessing the Plant Microbiome: Virtual Conference, October 22, 2021 - October 24, 2021. (2021)

Bezrukov, I.; Schwab, R.: Atlassian Confluence as an ELN and shared resource system. Digital Workshop "Living with Electronic Laboratory Notebooks", München, Germany (2021)

Lucke, M.; Ashkenazy, H.; Teasdale, L.; Paul, F.; Collenberg, M.; Schlegel, T.; Shirsekar, G.; Schwab, R.; Weigel, D.: On the relationship between alleles of the immune receptor RPP1 and its oomycete effector ligand ATR1. Congress of the International Society for Molecular Plant-Microbe Interactions (IS-MPMI 2023), Providence, RI, USA (2023)

Czech, L.; Peng, Y.; Spence, J.; Lang, P.; Bellagio, T.; Hildebrandt, J.; Fritschi, K.; Schwab, R.; Rowan, B.; Weigel, D. et al.; Scheepens, J.; Vasseur, F.; Exposito Alonso, M.: Efficient analysis of allele frequency variation from whole-genome pool-sequencing data. Population, Evolutionary, and Quantitative Genetics Conference (PEQG 2022), Pacific Grove, CA, USA (2022)

Lucke, M.; Shirsekar, G.; Paul, F.; Collenberg, M.; Schlegel, T.; Schwab, R.; Weigel, D.: Linking resistance and effector genes in the Arabidopsis-Hyaloperonospora pathosystem. 32nd International Conference on Arabidopsis Research (ICAR 2022), Belfast, Ireland (2022)

Chen, H.; Xiong, F.; Bischoff, T.; Wang, K.; Miao, Y.; Slane, D.; Schwab, R.; Laux, T.; Bayer, M.: Phosphorylation-Dependent Activation of the bHLH Transcription Factor ICE1/SCRM Promotes Polarization of the Arabidopsis Zygote. (submitted)

Lutz, U.; Bezrukov, I.; Schwab, R.; Yuan, W.; Kollmar, M.; Weigel, D.: Cryptic Variation in Adaptive Phenotypes Revealed by Panspecific flc Mutants. (submitted)

Karasov, T.; Neumann, M.; Shirsekar, G.; Monroe, G.; PATHODOPSIS Team; Weigel, D.; Schwab, R.: Drought selection on Arabidopsis populations and their microbiomes. (submitted)

Czech, L.; Peng, Y.; Spence, J.; Lang, P.; Bellagio, T.; Hildebrandt, J.; Fritschi, K.; Schwab, R.; Rowan, B.; GrENE-net consortium et al.; Weigel, D.; Scheepens, J.; Vasseur, F.; Exposito-Alonso, M.: Monitoring rapid evolution of plant populations at scale with Pool-Sequencing. (submitted)

Barragan, C.; Collenberg, M.; Schwab, R.; Kerstens, M.; Bezrukov, I.; Bemm, F.; Požárová, D.; Kolář, F.; Weigel, D.: Homozygosity at its Limit: Inbreeding Depression in Wild Arabidopsis arenosa Populations. (submitted)