Publications of RE Ley
All genres
Journal Article (151)
21.
Journal Article
162 (3), pp. 743 - 756 (2022)
Randomized Controlled-Feeding Study of Dietary Emulsifier Carboxymethylcellulose Reveals Detrimental Impacts on the Gut Microbiota and Metabolome. Gastroenterology 22.
Journal Article
185 (3), pp. 416 - 418 (2022)
Microbiome engineering: Taming the untractable. Cell 23.
Journal Article
119 (2), e2120125118 (2022)
Microbes set the (woodrat) menu: Host genetics control diet-specific gut microbes. Proceedings of the National Academy of Sciences of the United States of America 24.
Journal Article
97, 108808 (2021)
The microbiome affects liver sphingolipids and plasma fatty acids in a murine model of the Western diet based on soybean oil. The Journal of Nutritional Biochemistry 25.
Journal Article
6 (11), pp. 1443 - 1454 (2021)
Vertebrate host phylogeny influences gut archaeal diversity. Nature Microbiology 26.
Journal Article
6 (5), e00707-21 (2021)
Blowing Hot and Cold: Body Temperature and the Microbiome. mSystems 27.
Journal Article
9, e12198 (2021)
Struo2: efficient metagenome profiling database construction for ever-expanding microbial genome datasets. PeerJ 28.
Journal Article
2, uqab010 (2021)
MicroRNAs and extracellular vesicles in the gut: new host modulators of the microbiome? microLife 29.
Journal Article
71 (4), 004774 (2021)
Reclassification of Catabacter hongkongensis as Christensenella hongkongensis comb. nov. based on whole genome analysis. International Journal of Systematic and Evolutionary Microbiology 30.
Journal Article
6 (2), e00258-21 (2021)
Free-Living, Psychrotrophic Bacteria of the Genus Psychrobacter Are Descendants of Pathobionts. mSystems 31.
Journal Article
6 (1), e00939-20 (2021)
Genomic Insights into Adaptations of Trimethylamine-Utilizing Methanogens to Diverse Habitats, Including the Human Gut. mSystems 32.
Journal Article
370 (6521), eaaz6827, p. 9 (2020)
The role of the microbiota in human genetic adaptation. Science 33.
Journal Article
5 (6), e01045-20 (2020)
Large-Scale Metagenome Assembly Reveals Novel Animal-Associated Microbial Genomes, Biosynthetic Gene Clusters, and Other Genetic Diversity. mSystems 34.
Journal Article
5 (5), e00911-20 (2020)
Strain-Level Analysis of Bifidobacterium spp. from Gut Microbiomes of Adults with Differing Lactase Persistence Genotypes. mSystems 35.
Journal Article
15 (8), e0236703 (2020)
Epidemiology and associated microbiota changes in deployed military personnel at high risk of traveler's diarrhea. PLoS One 36.
Journal Article
11, 2471 (2020)
Sphingolipids produced by gut bacteria enter host metabolic pathways impacting ceramide levels. Nature Communications 37.
Journal Article
36 (10), pp. 3011 - 3017 (2020)
DeepMAsED: evaluating the quality of metagenomic assemblies. Bioinformatics 38.
Journal Article
36 (7), pp. 2314 - 2315 (2020)
Struo: a pipeline for building custom databases for common metagenome profilers. Bioinformatics 39.
Journal Article
11 (1), e03235-19 (2020)
Syntrophy via Interspecies H2 Transfer between Christensenella and Methanobrevibacter Underlies Their Global Cooccurrence in the Human Gut. mBio 40.
Journal Article
31 (1), pp. 8 - 10 (2020)
Iron Deficiency Causes Wrinkles in Host-Commensal Relationships. Cell Metabolism