Publikationen
Mikrobiomforschung

Zeitschriftenartikel (102)

1.
Zeitschriftenartikel
Akbuğa-Schön, T.; Suzuki, T.; Jakob, D.; Vu, D.; Waters, J.; Ley, R.: The keystone gut species Christensenella minuta boosts gut microbial biomass and voluntary physical activity in mice. mBio 15 (2), e0283623 (2024)
2.
Zeitschriftenartikel
García-Lozano, M.; Henzler, C.; González Porras, M.; Pons, I.; Berasategui, A.; Lanz, C.; Budde, H.; Oguchi, K.; Matsuura, Y.; Pauchet, Y. et al.; Goffredi, S.; Fukatsu, T.; Salem, H.: Paleocene origin of a streamlined digestive symbiosis in leaf beetles. Current Biology Epub ahead (2024)
3.
Zeitschriftenartikel
Walters, W.; Ley, C.; Hastie, T.; Ley, R.; Parsonnet, J.: A modified Michaelis-Menten equation estimates growth from birth to 3 years in healthy babies in the USA. BMC Medical Research Methodology 24 (1), 27 (2024)
4.
Zeitschriftenartikel
Daniel, N.; Wu, G.; Walters, W.; Compher , C.; Ni, J.; Delaroque, C.; Albenberg, L.; Ley, R.; Patterson, A.; Lewis, J. et al.; Gewirtz, A.; Chassaing, B.: Human intestinal microbiome determines individualized inflammatory response to dietary emulsifier carboxymethylcellulose consumption. Cellular and Molecular Gastroenterology and Hepatology 17 (2), S. 315 - 318 (2024)
5.
Zeitschriftenartikel
de la Cuesta Zuluaga, J.; Huus, K.; Youngblut, N.; Escobar, J.; Ley, R.: Obesity is the main driver of altered gut microbiome functions in the metabolically unhealthy. Gut Microbes 15 (2), 2246634 (2023)
6.
Zeitschriftenartikel
Casini, I.; McCubbin, T.; Esquivel-Elizondo, S.; Luque, G.; Evseeva, D.; Fink, C.; Beblawy, S.; Youngblut, N.; Aristilde, L.; Huson, D. et al.; Dräger, A.; Ley, R.; Marcellin, E.; Angenent, L.; Molitor, B.: An integrated systems-biology approach reveals differences in formate metabolism in the genus Methanothermobacter. iScience 26 (10), 108016 (2023)
7.
Zeitschriftenartikel
Clasen, S.; Ley, R.: Wie der Toll-like-Rezeptor 5 die Immunantwort umgeht. Biospektrum 29 (6), S. 637 - 639 (2023)
8.
Zeitschriftenartikel
Marsh, J.; Kirk, C.; Ley, R.: Toward Microbiome Engineering: Expanding the Repertoire of Genetically Tractable Members of the Human Gut Microbiome. Annual Review of Microbiology 77, S. 427 - 449 (2023)
9.
Zeitschriftenartikel
Clasen, S.: The sound of silence. Science 381 (6653), S. 37 - 38 (2023)
10.
Zeitschriftenartikel
Bretin, A.; Zou, J.; Yeoh, V.; Ngo, V.; Winer, S.; Winer, D.; Reddivari, L.; Pellizzon, M.; Walters, W.; Patterson, A. et al.; Ley, R.; Chassaing, B.; Vijay-Kumar, M.; Gewirtz, A.: Psyllium Fiber Protects Against Colitis Via Activation of Bile Acid Sensor Farnesoid X Receptor. Cellular and Molecular Gastroenterology and Hepatology 15 (6), S. 1421 - 1442 (2023)
11.
Zeitschriftenartikel
Mineeva, O.; Danciu, D.; Schölkopf, B.; Ley, R.; Rätsch, G.; Youngblut, N.: ResMiCo: increasing the quality of metagenome-assembled genomes with deep learning. PLoS Computational Biology 19 (5), e1011001 (2023)
12.
Zeitschriftenartikel
Pinto, Y.; Frishman, S.; Turjeman, S.; Eshel, A.; Nuriel-Ohayon, M.; Shrossel, O.; Ziv, O.; Walters, W.; Parsonnet, J.; Ley, C. et al.; Johnson, E.; Kumar, K.; Schweitzer, R.; Khatib, S.; Magzal, F.; Muller, E.; Tamir, S.; Tenenbaum-Gavish, K.; Rautava, S.; Salminen, S.; Isolauri, E.; Yariv, O.; Peled, Y.; Poran, E.; Chen, R.; Hod, M.; Borenstein, E.; Ley, R.; Schwartz, B.; Louzoun, Y.; Hadar, E.; Koren, O.: Gestational diabetes is driven by microbiota-induced inflammation months before diagnosis. Gut 72 (5), gutjnl-2022-328406, S. 918 - 928 (2023)
13.
Zeitschriftenartikel
Kleiner, M.; Kouris, A.; Violette, M.; D’Angelo, G.; Liu, Y.; Korenek, A.; Tolić, N.; Sachsenberg, T.; McCalder, J.; Lipton, M. et al.; Strous, M.: Ultra-sensitive isotope probing to quantify activity and substrate assimilation in microbiomes. Microbiome 11 (1), 24 (2023)
14.
Zeitschriftenartikel
Walters, W.; Granados, A.; Ley, C.; Federman, S.; Stryke, D.; Santos, Y.; Haggerty, T.; Sotomayor-Gonzalez, A.; Servellita, V.; Ley, R. et al.; Parsonnet, J.; Chiu, C.: Longitudinal comparison of the developing gut virome in infants and their mothers. Cell Host & Microbe 31 (2), S. 187 - 198 (2023)
15.
Zeitschriftenartikel
Clasen, S.; Bell, M.; Lee, D.-H.; Henseler, Z.; de la Cuesta-Zuluaga, J.; Parys, K.; Zou, J.; Wang, Y.; Altmannova, V.; Youngblut, N. et al.; Weir, J.; Gewirtz, A.; Belkhadir, Y.; Ley, R.: Silent recognition of flagellins from human gut commensal bacteria by Toll-like receptor 5. Science Immunology 8 (79), eabq7001 (2023)
16.
Zeitschriftenartikel
Kennedy, K.; de Goffau, M.; Perez-Muñoz, M.; Arrieta, M.-C.; Bäckhed, F.; Bork, P.; Braun, T.; Bushman, F.; Dore, J.; de Vos, W. et al.; Earl, A.; Eisen, J.; Elovitz, M.; Ganal-Vonarburg, S.; Gänzle, M.; Garrett, W.; Hall, L.; Hornef, M.; Huttenhower, C.; Konnikova, L.; Lebeer, S.; Macpherson, A.; Massey, R.; McHardy, A.; Koren, O.; Lawley, T.; Ley, R.; O'Mahony, L.; O'Toole, P.; Pamer, E.; Parkhill, J.; Raes, J.; Rattei, T.; Salonen, A.; Segal, E.; Segata, N.; Shanahan, F.; Sloboda, D.; Smith, D.; Sokol, H.; Spector, T.; Surette, M.; Tannock, G.; Walker, A.; Yassour, M.; Walter, J.: Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies. Nature 613 (7945), S. 639 - 649 (2023)
17.
Zeitschriftenartikel
Ruaud, A.; Pfister, N.; Ley, R.; Youngblut, N.: Interpreting tree ensemble machine learning models with endoR. PLoS Computational Biology 18 (12), e1010714 (2022)
18.
Zeitschriftenartikel
Barnett, S.; Youngblut, N.; Buckley, D.: Bacterial community dynamics explain carbon mineralization and assimilation in soils of different land-use history. Environmental Microbiology 24 (11), S. 5230 - 5247 (2022)
19.
Zeitschriftenartikel
Wilhelm, R.; Barnett, S.; Swenson, T.; Youngblut, N.; Koechli, C.; Bowen, P.; Northen, T.; Buckley, D.: Tracing carbon metabolism with stable isotope metabolomics reveals the legacy of diverse carbon sources in soil. Applied and Environmental Microbiology 88 (22), e0083922 (2022)
20.
Zeitschriftenartikel
Welter, D.; Ruaud, A.; Henseler, Z.; De Jong, H.; van Coeverden de Groot, P.; Michaux, J.; Gormezano, L.; Waters, J.; Youngblut, N.; Ley, R.: Free-living psychrophilic bacteria of the genus Psychrobacter are descendants of pathobionts. mSystems (angenommen)
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