Publications Microbiome Science

KM Kennedy, MC de Goffau, ME Perez-Muñoz, M-C Arrieta, F Bäckhed, P Bork, T Braun, FD Bushman, J Dore, WM de Vos, AM Earl, JA Eisen, MA Elovitz, SC Ganal-Vonarburg, MG Gänzle, WS Garrett, LJ Hall, MW Hornef, C Huttenhower, L Konnikova, S Lebeer, AJ Macpherson, RC Massey, AC McHardy, O Koren, TD Lawley, RE Ley, L O'Mahony, PW O'Toole, EG Pamer, J Parkhill, J Raes, T Rattei, A Salonen, E Segal, N Segata, F Shanahan, DM Sloboda, DCS Smith, H Sokol, TD Spector, MG Surette, GW Tannock, AW Walker, M Yassour, and J Walter, "Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies," Nature 613 (7945), 639-649 (2023).

Y Pinto, S Frishman, S Turjeman, A Eshel, M Nuriel-Ohayon, O Shrossel, O Ziv, W Walters, J Parsonnet, C Ley, EL Johnson, K Kumar, R Schweitzer, S Khatib, F Magzal, E Muller, S Tamir, K Tenenbaum-Gavish, S Rautava, S Salminen, E Isolauri, O Yariv, Y Peled, E Poran, R Chen, M Hod, E Borenstein, RE Ley, B Schwartz, Y Louzoun, E Hadar, and O Koren, "Gestational diabetes is driven by microbiota-induced inflammation months before diagnosis," Gut Epub ahead, gutjnl-2022-328406 (2023).

A Ruaud, N Pfister, RE Ley, and ND Youngblut, "Interpreting tree ensemble machine learning models with endoR," PLoS Computational Biology 18 (12), e1010714 (2022).

SE Barnett, ND Youngblut, and DH Buckley, "Bacterial community dynamics explain carbon mineralization and assimilation in soils of different land-use history," Environmental Microbiology 24 (11), 5230-5247 (2022).